XLOC_044238 (gene) - C. hemisphaerica

Overview
NameXLOC_044238
Unique NameXLOC_044238
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_6:240540..250936-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044238 ID=XLOC_044238|Name=XLOC_044238|organism=Clytia hemisphaerica|type=gene|length=10397bp|location=Sequence derived from alignment at scaffold_6:240540..250936- (Clytia hemisphaerica)
GGAAAGAAAACTGAAGAAAAGACTGTGACAGCACACTCACACTCTAAATT TTGACAAACTTTTTTCTGAAAAACAAACTCAAGACTTGCAATTTCCATGA ACGTCCTCTGGATAAACTGATAAAGTTATTAAATTTATTATAAAGGTTTT AAAAGAGAAGAGCAGAAGAAGGAGTTATATTTTTAAAGAACTCTTTTATG TCTTTTACAAGATCAAAAAGTTCAAGTAAGTAGGGAGATGTTTTGTTTTT TATTTTATTTAGCTAAGTATGGGAATTTTCAAAATGCTTGCAACGTTACA AATCATTTTCAGAAGCTCATTTTGGTTTGGGCTCAAACGAAGCGTATACC GTTGTGAGAGTGGGTAACTTGCATCAGTGGAGGCTAACATGCATAGCCGC CCTCAGATGAAAGATCTGGCTGGTCATTAAAATACAACTACGCAGCTCCG CTCGCAGCTCTACTCTACCATTTTTGTTTTGATTTAACTTTGTACAGTCA GGCACATCCTGGCAAATGAACAGGGTATTTTTCATTTGCGATTGGTGGCA AATGCAAGGGGTCGAAAACAAAAGTGATGTAATAGCACTGAATACCCCAC GCAATTGAACTGGGTTGGAAATATTTTGCTTCATTNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNTCTTTCATTTGAGGGCTATGCATGTTAGCCATTAGCCTGC CTCCACTGATGCAAGTTACCCAATCTCACGGTATATAACTAAGAGTAAGA TTCAGTCTAGGCCAGATGTCTTTTTTATATTTTGATATTTTGCGTAATTC ATAAAAATCCTCAATTTTGTGCTACGTGGGATGATTGGTCTGTTAAATCT CTTTGACAACAAATTTATCAATCAGTAGCTTCCACAGAGTGCAGATGTCT TGAATTTGGGACTTTGGATGTCAATATACCAGAATATACCGTGAAGTCGG GTAACTTGCATCAGTGGAGGGAAACTTGCATAGCCATCAAATGACTGACC AATCAAAAGCAGCAAAATTTCAAAACAAATGAACTGCGCAGCTTCACTCG CAGCTCTACTCTACCATGCCATTTTTGTTTCGATTTAATTTTGTATTTTA ATGACCAGCCCGGGTCATTCATTTGAGGGGTATGCATGTTATGTTAGCCT CCACTGATGCAAGTTACCCGATCTCACGGTATATCTTGGGATAGAATTAC CGTTGACAACTTTGACTTGAATTTTCCAAATGATTTTCATGATAGCTATG CCCTGACAAAGTTTCATTTTTTGTGCCGAAATCCCTTTAAATCACAATTT TTTCTGGTCCTTATTAAAGACAATGTCTGGGTAAAGGGAGTGACAGATAA GGCTGCGGCGTCCCATGCAGAGTCAGATAAATAAAAGCCATTTATTTGTG CAATGATATCCTCCAAACAAAATGTTTGAAAATGATTGAAAGTTGTTTTG AGCTGCTTCACATTCTATTGCTTTAAAACAATAAAATTAATTGTAAAGTT GATTTTGAATAAATTTGAATTGAATTCATAGGTTGCAGAGGGCTATGAAC CCCTAGGTTTATTTCACCCCATATATACACCCCCTGCGCTCTATGCACCA CTAAAAGTGATTACAGAGTACAAGATTTATAGTCACAAGTCAAAAATTAA CAATATAACAATATAACTAGTGTTGTTTGGTGGTAAATATTTTTACCATT TTGTATGATTGAAATGATCATAATTTCCAAATCCCCTTATCTTATTTGAC CCCTCTAACATTCCCATACCTGCTACGAAAGACTGCTGTACGCAATGTTT TTTTATATACAAAGACAAAGCAAATATACATATGCTGCTCTGCCACCCAA ATTTCCTGAGTAAATATAGTTTGACAGAAATTCTTGATTTCTTCACATAT ATTGGTCTAATGTTGACATCCCTTATCAAATTCTGACACATTTCTTTATA GTTATGGGAATAAAAGGAAGGTCAGAATTGCTGAGATTTTTTATCCAAAA TGCTTTGGGGGTAGTCTGGAGACAAAAAGAAAGATATGTTTGTAAATTTA ACGAGTAATTAGCTTGTATAACTTGATCATGAGTTAGTATCAATGCGTGA CAGAGTAAATAATCTCGAACCAACTTATACTTATGACTCTTCATTCATCA AGTAAGAGTGTCAAATGATATTGGAAAATACAAAAAAATTCACACAGTCA TAGCCATCTCATTTTGACCACAAGGACTTATGGATCACAAAAATTGACAG TTTCAAAATTTTTTTGAAACAATTTTTTCTAACACAAACCACAATCTTTT TTAACTGAGATGACAAGAGAATTACAAATTACACCCCTGTCTCACAGCCC CGGTGGAACTTCTTCTCACAGTACAGTAGTGGGAATAAAAATTTATATCG AAATCCCAGGGGTAAAGAAATTCTAATTGTTCCCAGGTCAAAAAAATCCA GTAGGGATGGTTTTGGAGTACAATTTTTTTCAATTGAGTTTCAATTGGGG ATGAAAATTAAATCAATTTTCCAGTAGGGCTGAAATTGTAGTAGGGTATT TTCCCCAACCGGGACANGAAAATTAAATCAATTTTCCAGTAGGGCTGAAA TTGTAGTAGGGTATTTTTCCCAACCGGGACGAAATTTTAGCCAAATTTTT CAGAGGAAAGGAAGTCCTACTTGGTTTGTGAACAGAGGGTGTCTTATTGG CATGTCATACTTTTGAGTTGTGTTTCACACTGTATTTTTTATTTGTAGTA GCCATGTCCATGAAACGATCTGTCATTTATTTGTTCCAAAACGATTTACG ACTTCATGACAATGAATGCTTAAAGATTGCTCAAAGTAAAGGGAATTTCT TGATTCCCTTATATTGTTTCCAGCCCAACCATTTCAAGGTAAACTTTTCT TAATACTTTGTACTATGCAAAGATCTAGCTGTTACATTCTTTTATTTAAA AATGAAAAAAAAAATCTGCACTGTTTAAAGGAAAATNAGTCAAGTCTAAA AAAGTAAGAATATGTTAAGAATATTTTGGCACTTTCTTAAAAATACTTGA CCCTCATCCAAAGTACACTATTCTTATAAAAAAAAAGAAAATTGTAAAAA TTTTTAAAACCCAGAAATTATCCCAAACTCACTTTTCTCTAACTCTCTTT TTTATAGGGAACGTATAGCTTTAACTTGCCAAGAAGTGGTACACACAGAA CAAAATTTCTCATTGAAAGCATCACTGATCTACGTGCTAATCTACAAAAA CTTGGTTCAAACTTAGTTGTTCGAAATGAATCTCCACTGTCAACCATCAA AGACTTGGTAAAACTTTGTCAAAATTCTGAAGCACCTGTCTCCTCCATCA TTTATCAAAAAGAAGTGACTTCAGAAGAGATTGATTTGNTACTTCATACA GGCTGGATGTCAAATCGGGGTCGTCAAAACGTGGCTAGTTTCTTGGTCAA GGACTTGAAATTAGACTGGCGTCTTGGAGCCGAATGGTTCGAATCGCAAC TTCTTGATCATGATGTTTGCAGTAATTATGGTAATTGGAATTATTCAGCT GGCNGACTACCCTGTTTGGGGTTTGTCATTGTTTCACAAGTAAGTTTCAG TCTCCTCTCTGTGAATTCGGTATGATGTCAAATTTAATAGAGTTTCCTCA TTTTTCTTAGTATTTTTTCTCTGACATATTTTTTTCTGTTGATAAAATTA CTTAGTTTTATCAAATATTCGTTTCGGTTTCGAGCATAAATTAAGGAAGA TAGGCTCCTACTCCTAAGGCCTAAAAGCCTGGAGCTGTCTATTGTGTAGA CTAGTTTGAATCATGCTCTCTCTATGTTAGCATAGTTATTTGATTTTATT GTTCTTATACTTTTAGAGATGACATTCCATACAATAAGAAGACCATCCCA GATACATATTCCAAGTTTCGTCAAGGAGTAGAATCTAAAAGCGAAATTCG TGATTTAATTCCTACACCACTAACCCTTAATAAACTGCCACCTATCAAAG GTGCCAGTCTTGGTGATATCCCTACAATGGAGAAGTTGATCGGTGTTCAA AGCTATATGCAAGATAACAGAACAGCTGTTCCACTAGAAGGTGGTGAAAG TGCTGGCTTGAAACATCTCCAAAAATATCTTTGGGACACTGATGCCATTT CAACTTACAAAGAAACCAGGAATGGTCTATTAGGAGAAGAATACTCGACC AAGTTTAGTATCTGGCTTGCTAATGGTTCTTTATCTCCAAGACAGATCTA CCATGAAGTCAAGAGATATGAAAATCAACGTGTATCCAACCAATCCACTT ACTGGAGTATCTTTGAACTGATCTGGAGAGATTACTTTAAATTTGTATGT TGGAAATATGGGAGAAAAGTGTTCTATTTATCTGGCATCATGGGCAAACA TTTACCTTGGAAACAAGACAAAATTGCTTTTCAGAAATGGTGCCAAGGTG AGACAGGTGTTCCTTTTGTTGACGCAAATATGAGAGAGTTACTTCATACA GGCTGGATGTCAAATCGGGGTCGTCAAAACGTGGCTAGTTTCTTGGTCAA GGACTTGAAATTAGACTGGCGTCTTGGAGCCGAATGGTTCGAATCACAAC TTCTTGATCATGATGTTTGCAGTAATTATGGTAATTGGAATTATTCAGCT GGTATTGGTAATGATCCAAGACAAGACCGTAAATTCAATATGATCAAACA AGCTCTTGATTATGATGCTGAAGGAAAATTTGTGAAAACTTGGGTTCCAG AGCTTACCAATCTTCCTGCTAACAAGGTCCATGTACCTTGGACTATTCCT GACCGGGAGCTACAAAGATTGGAGTTCTCATTAGGGCAGGACTACCCAAA GCCTATGGTAATGGCACCTGAGTGGGGCCGACATACACATAAAACGAACG GTAAAGCATTTCAAAAGAATGCAGAAAAGCCTCAAAGAGGGATTGATTTT TATTTTAAATCACCAGATGCTGGCCCAAGTGGTCAGGGTTCTGCTGGAGG AAAGAAAAACAAAAGGCGTTAAAATAATCAAATCTATGACGACGTACCGT TGAAATTTTTAAGATTGGAAATCAAAATCTTTAGTGTGTTCTTAGTATGT TGTGATATCTGACAGGTCAGATTTACCCTTACTACTACTCAGTGCTGTGT TGTATAGTAAAGTGAAAACATAAAATACAGTATGCAAGCTAACTTGTTTT GATTTTGAACGGTTGATACCACACATTTATAAAGCCCGAAGGGCTAGATG TCGTGCTTTAAGCTCTTCTAAGCAAAAAAAAGTGAATATCGCAAAAAGNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT AAGAATATGTTAAGAATATTTTGGCACTTTCTTAAAAATACTTGACCCTC ATCCAAAGTACACTATTCTTATAAAAAAAAAGAAAATTGTAAAAATTTTT AAAACCCAGAAATTATCCCAAACTCCCTTTTCTCTAACTCTCTTTTTTAT AGGGAACGTATAGCTTTAACTTGCCAAGAAGTGGTACACACAGAACAAAA TTTCTCATTGAAAGCATCACTGATCTACGTGCTAATCTACAAAAACTTGG TTCAAACTTAGTTGTTCGAAATGAATCTCCACTGTCAGCCATCAAAGACT TGGTAAAACTTTGTCAAAATTCTGAAGCACCTGTCTCCTCCATCATTTAT CAAAAAGAAGTGACTTCAGAAGAGATTGATTTAGAAAAACAAATCAAATC TTTCTGCAAAGAACAAAGCATTGAAGACTACCCTGTTTGGGGTTTGTCAT TGTTTCACAAGTAAGTTTCAGTCTCCTCTCTGTGAATTCGGTATGATGTC AAATTTAATAGAGTTTCCTCATTTTTCTTAGTATTTTTTCTCTGACATAT TTTTTTCTGTTGATAAAATTACTTAGTTTTATCAAATATTCGTTTCGGTT TCGAGCATAAATTAAGGAAGATAGGCTCCTACTCCTAAGGCCTAAAAGCC TGGAGCTGTCTATTGTGTAGACTAGTTTGAATCATGCTCTCTCTATGTTA GCATAGTTATTTGATTTTATTGTTCTTATACTTTTAGAGATGACATTCCA TACAATAAGAAGACCATCCCAGATACATATTCCAAGTTTCGTCAAGGAGT AGAATCTAAAAGCGAAATTCGTGATTTAATTCCTACACCACTAACCCTTA ATAAACTGCCACCTATCAAAGGTGCCAGTCTTGGTGATATCCCTACAATG GAGAAGTTGATCGGTGTTCAAAGCTATATACAAGATAACAGAACAGCTGT TCCACTAGAAGGTGGTGAAAGTGCTGGCTTGAAACATCTCCAAAAATATC TTTGGGACACTGATGCCATTTCAACTTACAAAGAAACCAGGAATGGTCTA TTAGGAGAAGAATACTCGACCAAGTTTAGTATCTGGCTTGCTAATGGTTC TTTATCTCCAAGACAGATCTACCATGAAGTCAAGAGATATGAAAATCAAC GTGTATCCAACCAATCCACTTACTGGAGTATCTTTGAACTGATCTGGAGA GATTACTTTAAATTTGTATGTTGGAAATATGGGAGAAAAGTGTTCTATTT ATCTGGCATCATGGGCAAACATTTACCTTGGAAACAAGACAAAATTGCTT TTCAGAAATGGTGTCAAGGTGAGACAGGTGTTCCTTTTGTTGACGCAAAT ATGAGAGAGTTACTTCATACAGGCTGGATGTCAAATCGGGGTCGTCAAAA CGTGGCTAGTTTCTTGGTCAAGGACTTGAAATTAGACTGGCGTCTTGGAG CCGAATGGTTCGAATCACAACTTCTTGATCATGATGTTTGCAGTAATTAT GGTAATTGGAATTATTCAGCTGGCATTGGTAATGATCCAAGACAAGACCG TAAATTCAATATGATCAAACAAGCTCTTGATTATGATGCTGAAGGAAAAT TTGTGAAAACTTGGGTTCCAGAGCTTACCAATCTTCCTGCTAACAAGATC CATGTACCTTGGACCATTCCTGACCGAGAGTNGAAGATAGGCTCCTACTC CTAAGGCCTAAAAGCCTGGAGCTGTCTATTGTGTAGACTAGTTTGAATCA TGCTCTCTCTATGTTAGCATAGTTATTTGATTTTATTGTTCTTATACTTT TAGAGATGACATTCCATACAATAAGAAGACCATCCCAGATACATATTCCA AGTTTCGTCAAGGAGTAGAATCTAAAAGCGAAATTCGTGATTTAATTCCT ACACCACTAACCCTTAATAAACTGCCACCTATCAAAGGTGCCAGTCTTGG TGATATCCCTACAATGGAGAAGTTGATCGGTGTTCAAAGCTATATGCAAG ATAACAGAACAGCTGTTCCACTAGAAGGTGGTGAAAGTGCTGGCTTGAAA CATCTCCAAAAATATCTTTGGGACACTGATGCCATTTCAACTTACAAAGA AACCAGGAATGGTCTATTAGGAGAAGAATACTCGACCAAGTTTAGTATCT GGCTTGCTAATGGTTCTTTATCTCCAAGACAGATCTACCATGAAGTCAAG AGATATGAAAATCAACGTGTATCCAACCAATCCACTTACTGGAGTATCTT TGAACTGATCTGGAGAGATTACTTTAAATTTGTATGTTGGAAATATGGGA GAAAAGTGTTCTATTTATCTGGCATCATGGGCAAACATTTACCTTGGAAA CAAGACAAAATTGCTTTTCAGAAATGGTGTCAAGGTGAGACAGGTGTTCC TTTTGTTGACGCAAATATGAGAGAGTTACTTCATACAGGCTGGATGTCAA ATCGGGGTCGTCAAAACGTGGCTAGTTTCTTGGTCAAGGACTTGAAATTA GACTGGCGTCTTGGAGCCGAATGGTTCGAATCACAACTTCTTGATCATGA TGTTTGCAGTAATTATGGTAATTGGAATTATTCAGCTGGCATTGGTAATG ATCCAAGACAAGACCGTAAATTCAATATGATCAAACAAGCTCTTGATTAT GATGCTGAAGGAAAATTTGTGAAAACTTGGGTTCCAGAGCTTACCAATCT TCCTGCTAACAAGGTCCATGTACCTTGGACTATTCCTGACCGGGAGCTAC AAAGATTGGAGTTCTCATTAGGGCAGGACTACCCAAAGCCTATGGTAATG GCACCTGAGTGGGGCCGACATACACATAAAACGAACGGTAAAGCATTTCA AAAGAATGCAGAAAAGCCTCAAAGAGGGATTGATTTTTATTTTAAATCAC CAGATGCTGGCCCAAGTGGTCAGGGTTCTGCTGGAGGAAAGAAAAACCAA AGGCGTTAAAATAATCAAATCTATGACGACGTACCGTTGAAATTTTTAAG ATTGGAAATCAAAATCTTTAGTGTGTTCTTGGTATTTTGTGATATCTGAC AGGTCAGATTTACCCTTACTACTATTGCTCAGTGCTGCGTTGTATAGTAA AGTGAAAATATAAAATACAGTATGCAAGCTAACTTGTTTTGAACGGTTGA TACCACACATTTATAAAGCCCGAAGGGCTAGATGTCGTGCTTTAAGCTCT TCCAAGCAAAAAAAAGTGAATATCGCAAAAAGTATTGCTGCTGTTGTTCT CGAAAACCTGCGAAGCTTTTTATTGTTCAAGCGCTGAAATTCTATTATAT CACGTGACCTAGGTAGGATTTCCCATCTAAACTCGGCACACTTTTCAGCC GAAGCACGACATCTAGCCATTCGGGCTTTTTAAATCTATGGTTGATACTA CTATGAATATTATTTGAATGCATACGAGGGTATACGAAAATGGAATTTGT ATTGTGTATTACATATAATGATTCAAGGATATGGGAGGATAGTATTTGTA TCAAAACTAAAAAAAAACAATTTTAGAGAGTATTTTTAGATACTTTTATT TATTTTGATATAACGTTTTATATAGATTGTGTTTTCATATAATGAAAATT TATTTTAGCCAATGTCTTTGTTACTATAACTTGTCTTGACTACCATTATA TACTTCAATTACTCATGTACTTTCCTATCCTACCAGTTTTGAACTAGAAT CAGAAGCAATAGAAAATTCAGTTGATCTGCCTGATACTATTCTCTCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00071181TCONS_00071181Clytia hemisphaericatranscript
TCONS_00071180TCONS_00071180Clytia hemisphaericatranscript
TCONS_00071179TCONS_00071179Clytia hemisphaericatranscript
TCONS_00071178TCONS_00071178Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00071179-proteinTCONS_00071179-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_6supercontigscaffold_6:240540..250936 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
24.54 22.85 6.73 5.65 15.08 11.7 10.04 9.32 6.27 6.84 4.06 4.94 4.81 2.85 3.75 6.65 11.01 19.88 1.68 1.86 29.62 26.18 25.59 27.33 13.12 14.68 11.45 8.54 22.27 14.9