XLOC_044522 (gene) - C. hemisphaerica

Overview
NameXLOC_044522
Unique NameXLOC_044522
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_63:620319..623045+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044522 ID=XLOC_044522|Name=XLOC_044522|organism=Clytia hemisphaerica|type=gene|length=2727bp|location=Sequence derived from alignment at scaffold_63:620319..623045+ (Clytia hemisphaerica)
CTTAGAACTAGCCCTAACAACCATTACTTTAGACACAAAGGCTATCATAA GCATTTTTATTTCCTCCCTGTTTTATTTTGTATATGTTTTGTTATTTACT GGCTAACATTGGGGTGTTTGATCTGAAGGTTTTACCTAGCATAATATTCG ATCACTCATTCATTGACAGGTAGATCCATAAATgtgtttgataaaaataa tttatttaatatagcaaaaactaaaataaattcAAGATGTCGTCTTTAAA AAGTGCAATGAAGAGTGGGCAGAGAACACACAGAGAACGTGGTCAAGTAT CTGGTAGGAAGCATCTTGGTAATTTGGAGAAACATAAAGATTATGTGCTG AGAGCTAAAGATTTTCAtcggaagaagaaaataatcaaagggctgaaaaa gaaagcatttgaAAAGAATCCTGATGAATTCTACTTCCAAATGGtttcaa gtaaaacaaaaaagggTGTTCACATTCAAGACAGACCTGACTCAAAACAG TTGACCAAAGAACAGATTAAGCTAATGAAGACACAAGATGTCAACTATCT AAATGTAAAACATAATGCGGAagctaaaaaaattgagaagttGAAATCTA ATCTGCATTTTACAAGCTTAGCTGATGCCCAACCAAGGACACATATTTTC TTTgtagattctaaaaaagaagcAAAGAACTTTGATGCTGCAGAAAGGAT GAATACTCATCCTGAGTTCTTATCTCGTACACACAACATACCAACTTTGG AAACACTCAAAAAAATGGAGTTTGAGCAACCTGCTCCAAATAGCAAGGCT GGAGAAAAAGGTTACAAAGAATTACAGCGAAGGATAGAGAGGAAATCCAA ACTGAACGAATCGAGAAATCATTTGGTACTTCAGCGCAAATTGATGGGAA AAGGTTCCGTTAGGAAACAAAAgactgaaaatgaagatgatgaGCCGCCT GTGTTTAAGTGGAAAAGTATTAGAAAACGCTAATGAAGTATATGAATTAG ATTTTATCTCACAATAAtcttgcttcatttcaaagctagaccaaaattta tttcctgaaaatttttgtaacatttttatAGAAGAAGAAAGGATATCTTT AGTAATTCGATGTACAggattattttgttttaaaaactacaggacatttt ttttaatttccttgCGGGCTAAAAAGTAACTAAACACAGAAACTAAAGTA GAACTTtataattgatttgaaattaagGCCTTATTTATCCTTAGCAACtt taagatttaaatttttcaaccGAGTGCATATCTTGCATGTCAATTTTTCC TTATTAAAAATcttgttgaaatattttgtctTTTCGATTACCTTGCTTTC ATGTGTTTATGTTTTCTTTCTATCTTTTtagaatgaagatgaaaagtaAT GAGTAGTGATGTTTACTCCTATTGTAAGCTATGCCAAATAAACCATACCC AGCAACGAAAACACATCTACACTAAGAAACAtcagaaaaagttgaaatgg gTTTTACAGAAATATGGACAGAAGATCAAGGAATGTCGGCCTTATCTCAG CAACCCTGTAATACAGGAAGGTGATTTTGAAACTGATAAGAACTTTTGGT GTCATTGCTGTGGCAATTCATTCaagaaacatgtgtctgattaTGTAAAA ACTATTTTGTATGGTGGAGTGATAGAACATCTTGCCACTGAAGAACATTG GGCTAATACTGAAACGTTCTTTAAAGAGAATGGTGCAGacgagaaattca aaatttctttcataGTTTCAGAGAAAGATATCAATTTATTCAAAAGTAAA CTTGAACCGTTGGTTGATGTCTATAATCATAGagctgaaaagaaaacaaa agcttTGGCAAAGGAAATTGAAACGCAAGAACATGCCAGGAAACTTGTTC TGGATTCAGCAAATGTTGGATCTTTTGCATCAAATAACACTGAATCTCAA TATAAGACAGTGAAAAACAAACACAGTGTTGTACAGAACCCTACTGGATA TCATGATGGTATCAGAGTGTGGAGAGCCGGCATTGTCAAATACAAGCAAG GTTCAAATCAACTGAAACCATTGAAATATCCATGTCGTAAAATTGAGAGG TTACATAAATGTACTGAATCCTCAATCTACACAGTCTCTGCTGATGGTGT AGGTCTCACATCAATAACTGCAAAATTTGATTCCAGAAAAGGAAATATCT ATACCGGAGCAACACCTCCTTGGCTACGAGACGATCATGTAGAGGATAAA GACCAAAGGGAAGCACCCTCATCTTCTAGAATTTATGGGCCTTCAATGGA AGATCTGATTAAGAATAAAGAAGTAAAGAGGAAAGCCAAGCTTAATCCCA ATAGAGTTGGTGCCAATTTTGATCATACTGTTAGCCAGAAGGATAGTGAA TGGTTACCTTCATTTGGAAGAGTCTGGAATAACGGTGCTCGTTGGAAGTC AAGACATGAATATCACAATGAACAGAAAGGTGCTAAGAAACCAAAAAAAG ATTAACTTTTAACTGACAAGCTGAATCTCATTGCCTTGGGATATTGGGGT ATTGTAAATAATGTATTTATATGGAAATGTTGTCATCACATCTgtttaat aaaaacaataacattataaAATCTTTTGATGGTCCTAATTTCAAAACCTA ttctatcaaaatatttttacaccTTTAAAAATATTGTCCTCAAAAATTAT GATTGAAACTTGAATTATGATTGAAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00071658TCONS_00071658Clytia hemisphaericatranscript
TCONS_00071659TCONS_00071659Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00071659-proteinTCONS_00071659-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_63supercontigscaffold_63:620319..623045 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
CCDC84coiled-coil domain-containing protein 84 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
39.79 34.02 32.54 33.49 34.99 25.12 21.75 22.27 19.53 15.51 15.06 13.95 12.96 13.44 15.85 15.38 18.23 20.43 9.66 8.95 20.92 18.5 50.2 41.55 17.99 18.12 9.45 9.68 27.84 32.57