XLOC_045090 (gene) - C. hemisphaerica

Overview
NameXLOC_045090
Unique NameXLOC_045090
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_80:386749..389681-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045090 ID=XLOC_045090|Name=XLOC_045090|organism=Clytia hemisphaerica|type=gene|length=2933bp|location=Sequence derived from alignment at scaffold_80:386749..389681- (Clytia hemisphaerica)
TGTGACCCTTTTGAAAACAATTTTGTTACAATGATCAACAGACATGTTCG
CTAGAAAATAAAACAAAATGGCGGAAAATTATGCTAGAACCTTATATTCA
TATTTTGCTAGAGAATCAAACGAGCTTTCATTTGATAGTGGAGTTGTGTT
GAAAATTGTCGAAAAACAAGTCAGTGGTTGGTGGCTTGCCATTGATGAAT
CTCGTTCTATGCTAAAGACACTGGTGGAGCTCACTATGGTAACCCTGACG
AAGTCTTGATGTTGGAGTCGAAACAAAACAAGGATACTCTTAATAATCAT
GAAGATTTTTTTAGTTCTGGATTGAAAAGATCAGCCGAGGATGCCCGTAG
ACTTGCTCAAGAGTATGTTTCCCCTGATGTGTTTTCTAATAATGTCACTA
CCAACAAGGATCGAAAGAGCTATGTATATGACATAGATAACAAATCGAAT
CAAGCCTTCGATAGCAAGAATGACGAGGCTAGAATTCAAATTTTGAATGC
TCTGTCTGACCCAAAGAAAGAATTGATACTCACTCATGATAGCTACCTAA
AGACCATGGATGACGAAGAGGCGCGAAAGGTTTTTGAGAGGTCCAATATT
CATCCGTATATTTACACCCAAATTCCTGGTCATTCAGCCAGCTGCAAAGA
AAGCCCTTCTCAACGTTTTCGTGTCAGCGTTAAAAACAAAGTAGGGGAGT
TTTTTATTCAAAAAGTGACTCGTAAAGATGCCGAATTATCATTATCAATA
GAAAAGGAAGGATCATTTTTGGTGCGTGAAAGTGAAAGCAGTGTAGGTAT
TTTAAGCAGGATTTTTTGAAACCTTTGCCATGTACAGTTTGTCCAGAGAA
AAATTAACTGGTGTGACCCCCCCTCCCCCCCCCCCCCCTNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNCCCAGCTTACTGGAGAATTTGTCCTGAATTCCATCTCCA
GTGGGAAAATATCCGAAAATTCCAGCCCAACTGGAAAATTGACTTAATTC
CCATTTGAAATTAAATAGAAACAAATGTACTCTTACAGCATCAAAGTGGA
TTTTTTGAACTTGAAACAAAAGAATTTCTTTTCCAGATATAGGGAATTCT
ATAAGATTTTTATCACTGCTGAGGGAAAAGTTCCACTGGGACTACGTAAG
GGACAGGCAGGGGTGTTAATGAATTTTGAAGATTTCAATTTTTATAAATT
CTGTTCCACGGTATAAGCCAAAAACAATGAAATCATTTTTTCTAGAAAAG
GCTGCGCGAAAATTGAAATTCGAGGACAATAAGTAGTTATTCCAAGAACA
ATAATGTTTCCTATAAACGCATTCAACGTTACAGCTTTTTTGAGTTTTAA
TTTAACTTTCTTTTCACAGCCTGGTGATCTCACCATCTCGATCAAGCGAC
AAAAACACATTGGTCATGTTTGGATTGGCAAAACAAAGAACGGAAAGTTT
CTTTGCAAAGAAACGAACCATTATAACAGTATTGAAAATATCATCGGAAA
ATATGTATCAACATTTCTAGTGTCAAAAGGAGGACAAGCTGTTCAATTGT
CCGTCAACGATGAAGATATTATCTCAAATGAAGTCAACGATTACAATTCG
TTCAAGAAGAAATCTTATTACATAGGCAGCTTGTCACAACAAGCTTGTGA
AGACAGATTGAAAGATACTGCAAATGGTTCCTTCTTGTTAAGCGAGGTCG
ATAAGGTAGGTGGATTTAACAACACGTTCTGCAATACTGTCTCTTTTTTT
TCTTCTAGTAGCCCAGCTGCCACACGACGTTGTTTCAACGTTCATCTAAC
GTTAAATGGATGTTGTGAACGTTAAATAAACGTCAAAAAACGTTGTGTGT
CAGCTGGGAGTAGGATGTGAATCGTTTTCAACAAGCGTTTGAAGATATTC
ATCTACTTACGTTTTTTTTAAGAGGAAACTATATAACAACATAAGGCTTC
AATGGCCAAAATATTAAGAATAAGTTAGGAACATTTTAACCCTTTGCGGG
CTTTGTGGGCTTTGCGGGCTCTAATACAACCGATTTCTTAGGAAATTGAC
AAAAAAACTCACCAAATGGTGAAAATAAGAACATTTTAAGAACATTTTTA
GGTTTAAAACTCAAAATGTTGAGAATACTCGATGGCTTCAAAAACTTTAA
AAGTTCTTTATTGAATAACGTGTGCCTCAGCCGAGCTAGAGCCTTAGGCT
GCGCGCATTCCCGGAATTGGTTTTGATATATGGGGTGCGTATCGTGTATA
AAATTCTCGTCTGAGAGTTACCCCAACTTCGGGGTAAAAAATCTCTTTAA
TATACTAAAATTTTTTACCGGGTGGTCCAAAAAAAACTTCCATAAGTTTC
AAATTTTGACGTAGAGCTTTTTGAAATTTGAAATTTATGGAAGTTTTTTT
TGGACCACCCGGTATATGTGCATTTCTCTTTTTTTTTACAGGAAAGAAAA
TGGATGTTGTCAGCCAAATTCCCTGCGATCGTGGGGCATTTTTACATCAC
TCTCGATAAAAACTATTCAATATGGCCATGTTTTCATTCGATTCATTCAG
CTCTTATCAAACAATCAAAGGAGTTGTCGAAGTAGCCTCCGTCTCGGAAG
AGGACTGGGCCTGAATTTGCGGACGTTTTCACAGTTTCACTTTCGTTTTC
GGCTATGCGACAGCGTTTTCAAGCAGAAAGCAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072646TCONS_00072646Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072646-proteinTCONS_00072646-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_80supercontigscaffold_80:386749..389681 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.06	0.06	0	0.03	0.41	0.16	1.53	0.44	0.9	0.61	0.22	0.71	1	1.18	1.54	2.01	1.47	1.43	0.81	0.51	0.62	0.61	0.46	0.61	4.21	2.52	0.04	0.22	0.17	0.14