XLOC_045247 (gene) - C. hemisphaerica

Overview
NameXLOC_045247
Unique NameXLOC_045247
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_86:982267..985582+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045247 ID=XLOC_045247|Name=XLOC_045247|organism=Clytia hemisphaerica|type=gene|length=3316bp|location=Sequence derived from alignment at scaffold_86:982267..985582+ (Clytia hemisphaerica)
TCACTTTTCTTCACTGACCTGGAGCAACGAATGCCTTCCATATTCAGTAA
ACCCTTCAAATTCACTAATCAATCATTGTTCTGGCAAAAGAATTTACCAA
CAGCTGATAAAGGGAACAAGTCGTTTCTAACAAACCAACCACAGTTCAAT
AATACAAACAAAACTAAAGCTTTCACGTCGAACACCAAGGCTATTTCGAA
GAAAGAGTCAACAACAAGTGGTTTTCAATATGAGAAATCTGAAATGGTGA
GCTCGATTTCTACTTGCTCAAACCTAACACAAACGAATAGCTCTAGGCTT
GTTCAAGCAACATCAAGAAATGTGAATTCTAAACCTTTGCACTCTACACC
TTCGATCAAGAATTTATCGTTGAATAAATCGGCTGATGAAATGAAAACTA
ACCAACTCCCACCACCAAAAACCATTCAAAACAGTCGTTCGGTAGTAACA
AATGTCACAAACCATAAAAAGACGCTTAAAACCCAACTGTCAACCAAGCC
AtcaagtttgaaagaaatccaTCGAAAGCAGACTAAAGTTTTCCCAAAGA
ACTCACCTTGTTTAGGTGGAAACATTATCGATATTCCAGATTCACCATTT
GATCAGCTTGTACCTGAAGAACTGTTACAAAGTAACATGAGTATGAACAA
TGAAGAGAATGCGTTACTTTACCAGGACCAGAATAATGTAAAGCCATCCA
ACGATTTTAAACGTAATGAGCAGAATTCGAAAAGTACAAAAGACAAAGAA
TCCGACCAAACGAACGATGATTGTTTTATCAATAAATCAGATTTCTCTTT
GATAGATGAATCAATGTTTGAAGATGGTTGTGATGATGAAGGCCAAGTTG
TACCAGATCAGAGCACCGGAAATGTATCAAGTATCAAAACCCTACAAACT
GATCAAGCTAACCTCGAGACCAACTTTACTGAAGGAGTTAAACAGCAATC
TCAACGTGAATCTTCACAGTTCAAATCAATTCAAAGTGATACTGATACTG
ATACTTCAAGAGTTGTCCCTTCGTCAAGTATTTCAAATGCTTTCGCAGAC
GATGATATTTTTCCGAAAGGTGACACTTGTGAGTACTCGTTTCTTTTCGA
TAACAAATTAGCTTTTTTGTAcattttacattgaattttaaTGCTTATAC
GATTTCATTTAAAATAGGCAATTCGACGCGGCGAATACATATCTTGGGTT
TTCAAATTTCCTAGACAAAAAATAATTAGGGGCATGGACCCATTCGCCAA
TGCTGCtttgattcaaaaaaaatttattctttaCTAAACACAGCGGTTGG
ATGCAAAACCTTAATTCAATTTATTTCCATTGAAATCAATAGATCTTTTC
ATTTTGtgtgcaacgactgcctcgttttgaaatctTTGCCAAAATGATCA
ACTCCCTTGAGTCTTCAAACTTCTTACgaactcctctgggaatcaattaT
CATTGAAATAGTTTGAAAACGTGGAAAGCGTTGCTCTTGACGTAATTGAT
AAAGAGGTCCATCCCTCAGGAGGAAAATAACAAACGGGCCTTCGACGCTA
TAAACGTTTATTAGGAATCTAAAAGTAATGAAATTCAAAgaccattttca
atttcagttcATGTTCAGGTTGACGAGaagagaaaaaatatcaacGATGG
TAGTAACGATGGTCCTTCTAGTCAGAAACTTGTTCCTCAATTTGGTCGct
gtaaaaagaagaaaaatgtatTCAATGCAACCAAACAGATTTCATCCACA
CAACCATCGTTAACAAACAGGTCTACGGAATCTACCAAAGTTGTTCCTTC
CTTTAAAACGAAAACCAATCCGTTTAAAGCAACGAGCTTTTCAAAATCGA
CAAAAATCATCCCTGAAAAGCGTAAACTGCAGACCACGCATAATGTGAGC
TCGACAACCAATGCAAAGAAACCGAAAGTCATTACTAAGACTCCGTCCAG
CTCTACCAAGCCATCTATAATCAAAACACCAACTAACTGCGTACAGAATC
GAAAGGAATTGAACGGTAATATCAGAAACTCACCTCTACCACCAACTCCC
TTGGTCACATCTACAGACGATTTTTCAACCAAGAAGAAGTCTTTCTCGTG
TGTGCAGAAAGAACCATTCACGTCATCACAAGGGCTTTCATTAGCTAATG
AAATCCTCCGCAATATCTCGAGCAGCCAATCAACAGTCAAGGGAATGAGC
GAATCACAAGGAAGCAATACAATCCAACAGGTACAAAAACATAGTTCTTT
AATTCGACATCTACCCCAGCGCACACTGAACTCCGTCAAAGTGATGATTT
TCTTGAGGCTTAAGGGGTGGTATATTTTTCAGGAATTGAGGGTCAAGCTT
GTAAAGTGAGGGTTAGTTTAAAGCCCTATTAATTTCATTGCTTAGCTGGT
AACTGTGCTGTTGTTTCGACTTGAAATGGTTTTCAAAAGACAATGTCTCG
TAAATTTCTATTGCTCTTTGGTGGGCAGACAGTATTAatcattctatttt
tattttacgataGACACCCGACTCGACGACATCCTTCACAAACAATCAAG
CTGCCAAGAAACCACGGGCTAAACCAAAGATCAATGAAGATATTAATGTT
GAGGAAATGGCCAGAACTGGAAAAGTTTGTATTTTGATACTCATTCATCA
TTTATTACTTCTTTCTATCTCGAAAactcccgtaataccgtacggACAAA
AGTTAGTTTCTTCTCAAATTTCGACCCCTTACAGTACACTTGCTGGGGAA
GCCAGAAAAACGAAACCCTTTACTTTGACAGTGCCCCCCTCCATGTGTAG
TAACACTAATATATGTCAAGTTACTTTCAACCCTGTAACAAGTGATAACC
TATATTTAACCGATTTTGTTCAAACTTTCTGTCCTTAAAGTAGCCATCCT
TTGCGGGCCTTTTTTCctccaaaaataaatttttatatcgTTTTTTCATA
TTCCAACCAATTGGTagttttttgtccatttttaaGCTTTCAAGGCCTTT
GATCAGTGAAATAAATACCCCTCATGGGGTatcttcttaatttttcttcA
GCTTTCGAAAGTGAATGCACCAACGTTGAAAAATTGGTTAAGAAGTAAAT
CAGTGGTTTTCAAAGCAAGTGAAAAGAAAGATGCTTTGGTGTTGAAAGCC
CTTGAATACCTTGGCATTCCAAATGGAAATCCTGCCGTATCTTAAGAAAA
TGTCAAGCTCGTCGAGGAACTGAAAGATACGAAGGTAAGAAAGAATTTTG
GTCCCCTGTGAAGAACCTCAAAATATCTTTGCTCTTAGTCTTGCTTATCT
CGATTgtgaaaattgc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072934TCONS_00072934Clytia hemisphaericatranscript
TCONS_00072935TCONS_00072935Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072934-proteinTCONS_00072934-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:982267..985582 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.4	0.96	0.75	0.37	0.31	0.7	0.56	1.06	0.21	0.46	0.89	0.34	0.27	0.3	0.24	0.57	0.33	0.44	0.12	0.13	0.53	0.46	0.35	0.46	5.54	6.19	0.18	0.32	0.37	0.25