|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00001777 ID=TCONS_00001777|Name=TCONS_00001777|organism=Clytia hemisphaerica|type=transcript|length=410bp CTGATCATCGGACTGATATAATACCCATCAACCTCATACGGTTTTTATCA TACTCCTTTAGACTGAAATGCAAAGAAGATGAAGTTGttttcaacaaaaa ctctaaagattttcttttttcttggcGTGGTATCTTTGGTAACCTCTAAA GACACAGAAAAACCGAAACTGGTATCATGTCCGGGAAACATAGCTAAGGA GATAACTACAGGCAGCATCCGGATATTTTGGAACCAACCGGTATATACGG ACAACTGTGGAAAGACATGCTTAACAATCATCCCTGATACATCTAGTGGT TCAAGGTTTTTGGTTGATTCAATCCATACCGTTCGTTATATAGCAAAAGA TCCATCTGGAAACAGAAATGAAGAATGTGTTTTCACTGTTGAAGTCAAAA GAAAAGGTAC Run BLAST on NCBI transcript from alignment at sc0000012:390777..391693+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00001777 ID=TCONS_00001777|Name=TCONS_00001777|organism=Clytia hemisphaerica|type=transcript|length=917bp|location=Sequence derived from alignment at sc0000012:390777..391693+ (Clytia hemisphaerica) CTGATCATCGGACTGATATAATACCCATCAACCTCATACGGTTTTTATCA
TACTCCTTTAGACTGAAATGCAAAGAAGATGAAGTTGttttcaacaaaaa
ctctaaagattttcttttttcttggcGTGGTATCTTTGGTAACCTCTAAA
GGTAATGAANAACAGTTGCAATTGATCAAATATTACCCTATTATCAAACA
CCACGACAGAATCCAAGCTGTATTTAGTTAAAAACAGATGGATCAACATA
CCTTCAACTATTAGAAAACGACTGATCATCGGACTGATATAATACCCATC
AACCTCATACGGTTTTTATCATACTCCTTTAGACTGAAATGCAAAGAAGA
TGAAGTTGTTTTCAACAAAAACtctgaagattttcttttttcttggcGTG
GTATCTTTGGTAACCTCTAAAGGTAATGAAGTATGTATTTTCTTATTTCA
TATCAACTTAATTCAATATTACACCCCTGTCGGAAAGCCCAAGTGGAGCT
TTTTTTCCACGACGGTGATAACAGTGTCTAAGTCAACAACTCAATATTCC
TGTGAAAAAAATAGTGAAATAAGTGCTGTAAGTGGAGTCTTAAAGTTAAT
TTGTTAAAAACTGTAAAATATTGATAGGCCAAAAGAGTATTCTTTGTTTG
TCTTTCAGACACAGAAAAACCGAAACTGGTATCATGTCCGGGAAACATAG
CTAAGGAGATAACTACAGGCAGCATCCGGATATTTTGGAACCAACCGGTA
TATACGGACAACTGTGGAAAGACATGCTTAACAATCATCCCTGATACATC
TAGTGGTTCAAGGTTTTTGGTTGATTCAATCCATACCGTTCGTTATATAG
CAAAAGATCCATCTGGAAACAGAAATGAAGAATGTGTTTTCACTGTTGAA
GTCAAAAGAAAAGGTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00001777-exon-sc0000012-1491911889:390777..390927 | TCONS_00001777-exon-sc0000012-1491911889:390777..390927 | Clytia hemisphaerica | exon |
TCONS_00001777-exon-sc0000012-1510915933:390777..390927 | TCONS_00001777-exon-sc0000012-1510915933:390777..390927 | Clytia hemisphaerica | exon |
TCONS_00001777-exon-sc0000012-1575043694:390777..390927 | TCONS_00001777-exon-sc0000012-1575043694:390777..390927 | Clytia hemisphaerica | exon |
TCONS_00001777-exon-sc0000012-1491911889:391435..391693 | TCONS_00001777-exon-sc0000012-1491911889:391435..391693 | Clytia hemisphaerica | exon |
TCONS_00001777-exon-sc0000012-1510915933:391435..391693 | TCONS_00001777-exon-sc0000012-1510915933:391435..391693 | Clytia hemisphaerica | exon |
TCONS_00001777-exon-sc0000012-1575043694:391435..391693 | TCONS_00001777-exon-sc0000012-1575043694:391435..391693 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000012 | supercontig | sc0000012:390777..391693 + |
Blast
The following BLAST results are available for this feature:
|