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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000340 ID=TCONS_00000340|Name=TCONS_00000340|organism=Clytia hemisphaerica|type=transcript|length=1033bp
ATTGGATCCAAAGAAGACTCAAAAGTAAAAGCCAGTCAGAACTACAGTCA
TAAAAATTAAACAGATATGTCATGTAAACATTCTTTCCTATCAATAATAA
AGCAACTAAAAGGGGTAAAGGAGCTGCTGTAAAAGAGAGGTGAAAAAACC
TAGAAACCTGATCAGTGGGATAAGGGATAAAGGGGATGAATAAAAAAAAG
GGTAGTGAAGAAAGGGATCAGCTTCTTTTCACCTCACATTGTAGTAGGTC
CTTAAAACCCTGTCtatattcaaaattttgccaatttgCCAAATACATCT
TACAGGTATCAATGTTCTGTTTATCTTCGTCCTTTACCAACCTTACATTT
TCCAAAAGGCATTTGCTCGCACCATTAATTACAATATCTATTGGTTCTAA
CCCAAAAGTATCACATgcatttatcaaatttccaagaACAAAATGACTCC
TTTCGCTACAAGTTAATAGATGCAGAAGATAAGGGGCAGTGATTCGATTT
TTAAAGAGTTGATCAAAAAGTTGTACCCTCCTTTGTAAGATGAGAGTTGA
TATCTCTGAGATGTGGAAAAGATCTAGCAAGTAGTTTTTACTGTACTTTG
ACAGGCCAAGCAAGGATTTAAGACTGGATCTCCCACACCTGTTGAGCTGC
AAGGTGGCAGTTTGGTTAATGTCAACGATTTCCAGGCCATAAAGGAGTTG
AGGTATTATCACTGTCTTGTAGATGGTCGCAATGCTGTAAGGGTGGAGTT
TCCTTAATGTTAATCGGCACCATCTCGCCAACTTTTCCTTGTTCTTATAC
GCAACTCCTATTTTAGTgtacgcccgccgcctttatgttccttCCCTCTG
TAATGattaatacaccgtttaggagtctcacTATCTCCACCgtaaaaacg
gtaggtaaaaatgtttactttagtactgtggacggttagaggaatgtaaa
cattgtcaattttttttctttcctttaacgAGAATGATATAAATATCTGA
ACATCAATCATAATTTCatggatctctcctgaa Run BLAST on NCBI transcript from alignment at sc0000001:1438304..1439336 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000340 ID=TCONS_00000340|Name=TCONS_00000340|organism=Clytia hemisphaerica|type=transcript|length=1033bp|location=Sequence derived from alignment at sc0000001:1438304..1439336 (Clytia hemisphaerica)
ttcaggagagatccatGAAATTATGATTGATGTTCAGATATTTATATCAT
TCTcgttaaaggaaagaaaaaaaattgacaatgtttacattcctctaacc
gtccacagtactaaagtaaacatttttacctaccgtttttacGGTGGAGA
TAgtgagactcctaaacggtgtattaatCATTACAGAGGGaaggaacata
aaggcggcgggcgtacACTAAAATAGGAGTTGCGTATAAGAACAAGGAAA
AGTTGGCGAGATGGTGCCGATTAACATTAAGGAAACTCCACCCTTACAGC
ATTGCGACCATCTACAAGACAGTGATAATACCTCAACTCCTTTATGGCCT
GGAAATCGTTGACATTAACCAAACTGCCACCTTGCAGCTCAACAGGTGTG
GGAGATCCAGTCTTAAATCCTTGCTTGGCCTGTCAAAGTACAGTAAAAAC
TACTTGCTAGATCTTTTCCACATCTCAGAGATATCAACTCTCATCTTACA
AAGGAGGGTACAACTTTTTGATCAACTCTTTAAAAATCGAATCACTGCCC
CTTATCTTCTGCATCTATTAACTTGTAGCGAAAGGAGTCATTTTGTtctt
ggaaatttgataaatgcATGTGATACTTTTGGGTTAGAACCAATAGATAT
TGTAATTAATGGTGCGAGCAAATGCCTTTTGGAAAATGTAAGGTTGGTAA
AGGACGAAGATAAACAGAACATTGATACCTGTAAGATGTATTTGGcaaat
tggcaaaattttgaatataGACAGGGTTTTAAGGACCTACTACAATGTGA
GGTGAAAAGAAGCTGATCCCTTTCTTCACTACCCTTTTTTTTATTCATCC
CCTTTATCCCTTATCCCACTGATCAGGTTTCTAGGTTTTTTCACCTCTCT
TTTACAGCAGCTCCTTTACCCCTTTTAGTTGCTTTATTATTGATAGGAAA
GAATGTTTACATGACATATCTGTTTAATTTTTATGACTGTAGTTCTGACT
GGCTTTTACTTTTGAGTCTTCTTTGGATCCAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000340-exon-sc0000001-1491911889:1438304..1439336 | TCONS_00000340-exon-sc0000001-1491911889:1438304..1439336 | Clytia hemisphaerica | exon |
| TCONS_00000340-exon-sc0000001-1510915933:1438304..1439336 | TCONS_00000340-exon-sc0000001-1510915933:1438304..1439336 | Clytia hemisphaerica | exon |
| TCONS_00000340-exon-sc0000001-1575043694:1438304..1439336 | TCONS_00000340-exon-sc0000001-1575043694:1438304..1439336 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001 | supercontig | sc0000001:1438304..1439336 . |
Blast
The following BLAST results are available for this feature:
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