TCONS_00002138 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002138
Unique NameTCONS_00002138
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2049

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002138 ID=TCONS_00002138|Name=TCONS_00002138|organism=Clytia hemisphaerica|type=transcript|length=2049bp
aaaacaaaccgaaaaattaaaatgtaaaaagatGTTTGGATACTTTTGGT
AAAATCTCGATGGTTCCATAATGAGTTGCTACCATCGTAATAATATTGTC
TTGGATTCGGCTATTGAAACTTAATAACAgtgaagaaaaattgaaagtga
agATGGGAACTTGAACGGAATTTCTCGAATAATACTCAAATACCAAAGAT
TTCTGACTAGAAGAACATCTGGAACACGAGAGAATATTTTATACGGCAAT
CATAAATTGAGTAGTATACAAATGCCGAAAATTTGATCAACAAAACTCAT
TGAAACTAAGTTCATCAGACATTAAGAACCTCAACTGTATTCAATACTAT
TTACAAGATGGTTGGAGCATCATTCCGCAGAGAGTTCCATATGGCGTTTC
TTCTTGGTTTATCCTTCGGCTTCTTTATTGCTGTCATATTTCGTGAATTG
CAATCTTCGTTTTCTGAAACCAAAGATTTGGTCAACAAAGGACCACCATC
TGGCAGAGCAATGGAAGAAGATTATGCCATGCTATTAAGTGAAGAATATG
AAGGAAAACATTTGCCACCTCCTTCCAAACCTCAACCTGTTGATAAACCA
ATCATATTCAATGATCTAGATTCTATACATCATAAAGGTGGTGACCGAGT
TGCTAAATTACTTTCGAAGAAGGTTCGAATTCTATGTTGGATCATGACGC
AACCGAAAACATTGAAAACCAAAGCACAAGCTGTCAAGAACACGTGGGGA
AAACGTTGTAATACACTGCTGTTCATGAGTTCAAAGGGTGATAAAGATTT
CCCAGTAGTTGGGCTGAACGTACCAGAAGGTCGAAAAAACTTGTGGTTGA
AAACACGCGCAGCTTGGAAATATATTTACGAGCACCATTTCTACGACGCT
GATTGGTTCTTAAAAGCCGATGATGACTCATTTGTCGTTCTCGAAAATCT
ACGTTATTTCTTATCAAAGCATAATTCAAGTCAGACTCATTATTTTGGGC
GACATTTCCGCCCTTTTGGCGGCTACAACTCTGGTGGGGCGGGCTATGTT
TTCAGTAAAGCCACCCTGATAGTATTCAACCAAGTACTACGTGATCCAAG
TGTTTGCAAACTAAAAGCAGGCGCCGAGGATGCAGAAGTAGGCGTTTGTT
TACGAATGATGGGCGTTGTGCCCGGTGATACTAGAGACGAATTTGGGCGT
GAAAGTTTCCACCCGTTTGCGCCTGATTATCATTTAGTACCGAATGGTAT
ACCCACTACGAACTGGTTACATAAATATAATAAACATCCGGTCAAATCGG
GACCTGGATGTTGTTCAGACCATAGTATAGCTTTTCATTATATTCCGCCA
AACCGGATGTATGTGATGGAatattttatttatcatttGAGGCCGTTCGG
TGTGCACCACGTACACAACTGACATCATTCAGCCTAGTTTGCTACAAGTA
GTGCTCTGAATGGTGACATTGGGTTATTCTAGAAATACTCTGTATTTTGT
TATCGTCTCCCTTTTTACTTTACAAATAGTAGCTCTTATTAGAGCGTGAT
CAGTTCTGTTTACCAATAATCCATTTCAACCGTGAAATTGTTCATCGGTA
TAGGGGGTTGTTATATTGTTCTTGGAAGTAATAACATTCGAGAGATTCAT
CCCTGACGGaatatttataattttaaaatcgaaattgaTGGGAAATTGGT
TCTGTTTTCATcaccatttgaaattcaatggaaaaatattgcattccaaa
accatccccacttgGGTTTTTGACCTTGATCCCCCTTTGGACTTCGATAG
AAATGTTATCTCCACTGTTgtgggaagaagttccaccggggctgtgagac
atgTGTCATAAAGCTTTTAACCAATGAGAGATTTTGGCACTGCCACTTGT
GGCTTTTTATGAATATCGATCAAGTTTATATTGTAGATATTTTTTGAATC
AATTTATATAAAAGTAAAGTGACTctatattttttagtatttttaataaa
ttatatgaaaatataaaggaataacaaaaatttaaaaattcatacTCTA
Run BLAST on NCBI

transcript from alignment at sc0000018:363997..375731-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002138 ID=TCONS_00002138|Name=TCONS_00002138|organism=Clytia hemisphaerica|type=transcript|length=11735bp|location=Sequence derived from alignment at sc0000018:363997..375731- (Clytia hemisphaerica)
AAAACAAACCGAAAAATTAAAATGTAAAAAGATGTTTGGATACTTTTGGT
AAAATCTCGATGGTTCCATAATGAGTTGCTACCATCGTAATAATATTGTC
TTGGATTCGGCTATTGAAACTTAATAACAGTGAGTGATTCATTCTTTTTA
TTTTTACCATTTGATTTTTTATTACTTGGCTGGTTTCATGCTTCCTGAAC
GGGGTGGGAAAAAAGTTACTCTTAGGTTCCAAATAAACGGCAAATTCTCT
ACTCCCCCCCCCCCGGCCCTTTTTAGGACCCCTCATTTATTATTCTTTAA
GAATATTTTCAGCTGTCAAAGAGATGACCCCTTATTTTGCTCTAAATAGC
CTGATTTTAGGCTTGAAACTCAAAAAGTTAAGAACATCCCAAGGCTTTTT
TTTGGATTTTGGATGTTTTATAACAAAAAACGTGTAGCTTGGAGTTGTTT
TAGGAATAGACTACTTCCATTTTTTGTTCTTGTTTATATTGGTAAAAAGA
AATGTTTTAAGCTCATGGGCCACTGTATTTCTTATTTAGACTTTCCTGGC
TGGTCTTTAGTATATATCCATATCTCACTGGTAACAATTCCGAGAAACAG
CGCTTGTCAATCTTGAGATTTTAAGCCCACGTCACTAAAAAACAGGATGG
TCGAAGGGTTAAGACTCGTTATGCTCGTGTTATAAGGTATGCACAATACT
AGTGCTATATTCCAAACCCTGTCAATCCCCCGGGGGGGGGGGCACTCGAT
TTCTAAACAACGGCATGTGCCGTCAAAATATTGGCTTTCAAAATCAAACC
TTTACAGTGCAACCCTTGAGCAGTGAAAAGGTACCCTTACAGTGCATTTT
ACCGAACGTTTCTGACCCTTACAGTGTAGCTTGATTTCATATCTTATTTT
GCTGAATCCATCTGAAAATGAGCCTAAGATGTCGATACAATGTGCAAAAC
AAATTAAAATGGGTGCGAGTCAAAACTATAAAGATACATCCGATTTTTAC
TGTCAGACTTGTTATTCAGCAGTCCCCAAATATACCCTTACAGTGTATCC
AGCTAAACGAACACCTTTGTAGTGTACTCTATCAAAATACACCTTTACAG
TGCATTTCAAGGGTCTCGAAAAACCTAGCCTTGAGGGTATGTGCTACCGT
GGGTCGGACCATATGAGTGATCCCCCAGAGCTGTCGATACAGTAGTAAGA
ATTTTAAAATCATAAGATTTAGACATCGATACTGTATAGCATTGAATATG
CATTTGTTTTTTTATAAAAACATCCAAAAATTTTGAAGCCTATGGATGTT
CTTAACTTCTTGACTTTTGAGCCTAAAAATGTTCTTAACATATTCTTATT
TTCACTATTATGAGAGTATTTTTTGTCCATTTTCCAAAGAAAATAGATGT
TTTAGGGTCTACAAAGCCTTAAAATGTTCATAACTTGTCCTTAACATTTT
GGCCATCGAAGCCTTATGTTCTTATATAGTTTGTTCTTATAAAAAAATCA
TGTTGTGTATAGCACTGAATAAGTGTCAATGTTTATCATTGAAATTAACG
TTTTTAAAGGAATACACAGGAAAGTATCTATCCTTTTCTTTTTTTCTCTT
TCTTTACTCGTTAAATCTAATCCTACTTTGTCTTAACACAATGTTAAGAT
GACAGCTTTGTTAATTTTTTTCATTTATGTATAGGTTACCCGCTGTATTA
AAGTAATCTATTTTTTAGGAGTTATTAAGTTTTTAAAATGGCTTCCAGTT
CAGTCTAGTTTGGTTCTGCTTCGGTTTGGGCCTTTTACAGTTGTCCTGAT
GCTAAAACAGCGACAATATATTCTATTCTTTTCTAATGAATGGTGTTATT
ATGATCAAAGAAAAACAAGTTTTGAAAAGAATAAAATGTAACAAGACACT
TTCATATATGCGTCACTTGATGGTCGGAAAATGACTTGACTGACTTCTAG
GGACTCTTGTGTATAATAACACATTCATGTCAACGTGGTGTAATGTCTGA
TATGTGGAAAAGATTGTTTTATGAAATCTAAACTTGAATACGTTGTAGTT
GTTTTCAGAAGGATGGCGTTTACGAATTATAGACTTATCAGGACTAATTC
AGTAGCGTAGCCAAGGGGGGGGGCGCAAAATTTGTGTAGGAGAGTAGATT
TTTATGACACAGTAATTATATTTTGTAATTATATATCTGATAATTATAAT
TATAGTGTCAAAAAAATCTGCTCTCCTACACAAATTTTGCGCCCCTCCTG
TCTACGCTACTGCAATTAAGTAAGTAAGTCATCGACCACAGTCAAAGGTG
ACTTTGAAGGCTCCTCTTTTGATAGCTATGGTAAGAGAGGGTGACACTCT
TTCTGACACTCTTTCTCCCTGGATTGCTCCACTAACCCTTAATCTTTATC
TTAATTTTGGAGCATTAATCAGAAAGCATCAAGTTTTATTTTGTACTAAG
TACGAAGTTTTTGGTATAATCCTGTCTGGGACACACGACCTTGCGTCGGT
GTTGAATTCTCTACGTTTGCACTACGGCCAGGCCTACACCAAAGCCTGTC
TGAAATGAAACTAGTTTTGAGTTTAATTGGGTCAAATGACCTCAAATCCC
AGAAGTCATTGGATTGATGTAATACACGTTTTTTTTATGAGAACATCCAA
AATGTTTGAAGCCTTCGGATGTTCTTAACTTTTTCAGTTTTAAGCCTAAA
AATGTTCTTAACATGTTCTTATTTTGACCGTTTTGTGGGTATTTTTGACT
CTTAAAATGTTCTTAACTTGTTCTTAACATTTTGGCTATCGAAGCCTTAT
TTTCTTATATAGTTTGTTCTGATAAAAAAAAACGTTTAACAACTAAAAAG
AAATTTGACGTCATTTGGCCCAAACCATGTGTTTAAAGCTTGAGAATTTT
TGAGTACTATAAACCTTTTTCCATGAAAGCTTTTTAGTACATAATTTTCC
AACTTTGAACGTAATTTGAATGGTAGTACTGTATTTGAGAGTGGTAAGCA
GTCAAAGTGAACAATCAAAGAAAAAGTTCTTTCCTATGTGATCCTAGCCC
TTTCTACACTATTCTTATTCATTGAGTGTATCATATCAGTTAAATAGTTT
TAAAGATTTTAGCGTTGTCAAAAGTGAGCCAAATCAAATTTCTAAAGCGG
CTTTGCAGAAAGCTAAGCTCTATTTTAATTTGCTTGGCTACGAAAAGCTC
TTTAACACTTATATAAAATGTAGCCACAATATATTTGCTATGATGATTTT
CTTTATCACCCTTACACAACTTGTACCTATATACAAGCTGTTATTGTAAG
CAGTTACTTTTATAATCATTCTCTCGAAATAACCATACCAGCCTTCTCCA
AGGAAACGGCAAAAAGATTTCAAGTAGTAATGTCCCCGCAATGGACACGT
CAAATCGCTCGGCTGAAATGGGCGTTTTTTTCTGTAAGAACATACGGTTT
TGAGGCCAGAAATTTAAGAACATTCTATGAGCATTTTAAGGCTTTTTGCG
CTCTTTTACACAAAAATACCCACAAAAATGCAGAAAATAATGACATTTCA
AGAGTACATTTTTAGGCTTTAAACACACAAAGTTAAGAGCACCAAAACAG
ACCCAAAGGGATCAAAAATCACCCTTACAAAACTTGAAGCTGTATACAAA
CTGTTATAGTAAATAACTTTCCCCGAAATAGCCCTAACAGTCTTCTCCAA
GGGGCCGACGGAATGATTTTGAGTAGTAAGGGCCTATTAGAAACGTCAAA
TCCCAAATATATACTGGTATACATTCTTTATTAGAATACACGGTTTCGAG
GCCAAAAATATAAGAACATTCTAAGAAAAGTAAAGGTTTTGTGCGCTCTT
GAAAATTAGGTATAATAGTCACAAGAATGCTAAAAATTATAGCATTTTGA
AGCCTTTTAAAAATACATATCTGTACTAGTTTTAAGGCCGATAATGTAAA
TGTTGAATTTGAATACAATATTACATTGTTGTGTGAATAGGGGTTTATGA
ATCATATTGAAATATTTATCACGGTACACAATAAGCCTCTAAGCACATTT
TCTTTCGATTGTTTGATTTCTTAATTCACAGTTAGGTACTAAATTCGTTA
TTGAAAAACAGTAAATTTTTGTACGGTCTGTAAATTATTAACTTTTATGA
ATTAGATACATTGGCAGTGAATATTCACATGTTTGTTAAGAATTATTAAA
TTTTTATTGATTTTCGTATTCTGCTTTTCTTTAGGTATCATGTAATATTT
TCCATACTAGCTGTGTCCTAAATGTTTTTTGGATTTTCGTTGAAAATTAG
AGTAAAATTATGGATTGAATTACCCTGGCGCAACGATAGGCTGTGGTTTT
GGTAGATTTTTTTTTGCTTTTATAAAGAAAAATATGGGAATATCACGCTC
CCATAGGTTTGGTTGTCCTTTTTCTTATGTTCGTTTTTCATACTAATTGA
AAAGGTATTTGGGAAAGAACCTCTTGCACTCCTGAACCCATGAGATTGGC
CAGTTGATACATACTGTGTTTTCTGAAGAGTTCTTATTGTCTAAATCCTG
ACTGACTGAGGGCAACGGTAAATCACCACTTTTACAGTCCTCGACACTAT
TGGCAGGATTTACGGGGATATGGCGGTACTGTTCAAGAAATGACATGTTT
CCTGTCATTTAATGATTAATCTTACNAGATTTACGAGGATATGGCGGTAC
TGTTAAAGAAATGACGTGTATCTACATGTTTCCTGTCATTTAATGATTAA
TCTTACCGGATTCTCTTTTCCATAAAGTTTGTTTTTGTTAAAAATATAAA
AACGTTTAGCTAACTATAGGCGTTTATAGGCACAAATAAAGTAGCAAATT
ATTTCAAAATTCAGTTATCGACCAAGTACGGCTTGAGTTAAAGATGATAC
TTTAAGATTTTCTCTAATTTTAATGCTCTCAGAAATATCTTTTTAAAGGC
ATCTATTGTTTTTTTAGGTTTTGCATTAAACTGTCAAATAAAGTGCATAT
TATAAGGTTTTGAGAGACTGTTCTTAAAATTAAAGGGGTTTAGACTTGAA
TGTTTTCTAAACAAAGTCGTATTATAAGAGTTTTGACCCTATCATAATTT
CCTTCATGTTAAACGTTGTAACAAAATAAAGGTCGATATCTCGTGGTGAT
TTTTATTACCTTAAAGAATCTAAAATGTTGTTAGAGTATTTTCGTACAGT
TTGACAAATTGTATGACTGGCCTGGTTGTTGGTCTTTGTTAACCTTTAAG
TCGTATAACTTTGATCAGGTTAGAATGTTGAACTAAATTTTGTAGTTTTT
TATTTTCAATCAGTTGTTTTGCACGTGGTAATGATATTATTGGACCTTTT
TAAATGTAACATTTTCTTGATAATCAGTACATGCAACGAGATTCATTTTA
CATGGTATTTATCTAACTATTTTGGTGCTGCAAAAGTTTAGGGTTCATTC
CCACTGGGTCTTTGTGACGCGGGGATGTTTTTATTTATCGAATAAAATGT
CACTTTAAATCTCCTTCGTTATATCATACCATACCATTTTCAAAAGTTCT
TTAAATCTTTTCTAACATTTTTATCAGTCACTCATATCAATTAAACTCTT
GTAAGATAACCGGTAAATCCTACAAACATTTCCATTCAAGTCTTGTCATC
TTGTAATCCAACTTTTACAAGTCCTCTTGACTCATCTTTAACAATATATT
GATTTTCTACCATGTACATCAAGGCGTAAGTAAATGTAGATGAAACTATA
TGCAAAAGTTAAACTTTTTCTAATGCTTGGATTTCTTGCTTTTTCAAGCA
CGCAGTCATCAGTTGGTTTCATTAGTTAAGGTTAAGTTATTTGAGTATGT
AAAAGTTGAAATTTCATATGGAAAAAAGGACTGCATAGGCGGTTTTAGAC
CATGTCGAACTCAGAGGAAGAGATTTGTAATTGTGATTTCATTGTATTTT
AACGAGCGTTGCACTCCTTCGCATGTTTCCAACGTACTTGCTCTATTGTC
TTAACTCCGCCATTGAAAGTAATTGCGTTTTCTCAATTCTTCTAAACAGT
GACTTTTAGAATGAGCATATTTTACCAGCTTTTATTTAAATTAGTGGAAT
GGTTTTTAAGCTTTTTGGAACAGGCTTTCTGTATCAGTGAAGCTTACATG
TAAAACGGATAGTGCCCATCCAATTTTTAAACGGCGGCATGTGCCACCAT
ATAATTGGTATTCGAAATCGGACCTTTACAGTGCAGCTTTTGAGCAGTGA
AAAGGTATCATAAAGTGTATTTTACTGAATGTTTCTGATCCTTAAAGTGT
GGTTTGATTTCATGTCTTATTTTGCTGAAGTCACCTGGAAATGTGCATGA
AGTGTCGACAAGGTGTAAAAACAAATAAAAAATGCGAAATGGGTGCGAGT
CAAAACTATAAAGATAAAGATTTCTACTGTCAGACTTGCAATTCTGTAAG
AATTATCATTCAAAATCTTTGTTATATCCTTAAATTTTTTTTTCATTGTC
CATCCAGCTAAAAAATAGACCCTTATAGCGCACTATCAAAAGTATACCCT
GCAGTACATTTTAGGGGTCTTGAAATACCTACCCTTAAGGCGGCTAACTC
GATTTGAGTCCCCCCCCCGGATGTAAAAATATGTTTTTATAAGACGAGAC
CAATTTAATTTGTTGTTCTACGGGCGCGGCCGACCCAGTATTTGCTGCAA
ACGAAAAAATAATAATATTGAATTTCCTGTGCCAGAAATTTCCAATAATA
AGTAGTCATTGAAAAAATTTACACTTAAAAAAGAATTTGAAAAAAGACTC
TAGAATCATGAAATCTCNGATTTATGTCTGCAGTTTAGTCTAAAATCTTC
CAATCAAATTATAAGAGGCCAAACAGTGTACGCGTCACCGAGTTCAATTT
CGTATTCTGTTGAAGTTTTTCATATGAATATGCTAAAATACTTCAAACTT
TTCAGAAGCTTTTACGATGAAGAATTTATATTTCAATGAATTTAACAAAC
ATTTATTCAAACAATATTTTTCTATCAACCCCCTTGAACAATTTTTCCCT
ATATTTTTGTTTCAAAATTATTATCCTTTTTGATATGATTTTTGGTAAAT
TTCATTAGCTATTAGAAACTCTACAGTGATAAAAATTTATTGAATGTCTC
TAGATCTGGCCCAATATAAAGTGTGACAGTTTGGAAATAATTACCAGGTT
AGCGAGTATCTGTAACTCGAACACGCGCAGGAAACATAAATTGTTCGAGT
TAAGGAAACATTCGAGTTGTAGAGGTTCAACTTATGGAAACTACACTGTA
CTAATGTCAGTAGAATACTTCTCGAAGTACCTAAATCCTTAAAGGGCCCT
TAAAGTAAATGGTAACGGGAGTATTTAAAAAACATATTTATTGTTATTGC
GATTTTCAGGCTTGACACTTAGAAATTTACTAGCATTTCTATATTATCTT
ATATTTAGGTGAAGAAAAATTGAAAGTGAAGATGGGAACTTGAACGGAAT
TTCTCGAATAATACTCAAATACCAAAGATTTCTGACTAGAAGAACATCTG
GAACACGAGAGAATATTTTATACGGCAATCATAAATTGAGTAGTATACAA
ATGCCGAAAATTTGATCAACAAAACTCATTGAAACTAAGTTCATCAGACA
TTAAGAACCTCAACTGTATTCAATACTATTTACAAGATGGTTGGAGCATC
ATTCCGCAGAGAGTTCCATATGGCGTTTCTTCTTGGTTTATCCTTCGGCT
TCTTTATTGCTGTCATATTTCGTGAATTGCAATCTTCGTTTTCTGAAACC
AAAGATTTGGTCAACAAAGGACCACCATCTGGCAGGTAAGCGTTTATTCC
GATTTTACCATTATATCCCAATTAGCACAGCCTTGATTAATCCTTGAGTG
AAGCAGTACACCTCAGTACATTCAAGATTTGTAGTGCTATATTAGACTTA
AGAAAAGAAAACGGAGGTCTATTGCAAAAGTTTATATACAATCTCCCTGG
TAGACGCTGAAGTATAGAATTTACCACCTAGCTCTTATCTTAAAGATGGT
TTCCACTATCGAAGTTGTTTGACAATATTCAACAAAGCGTCAAGAGAAAG
TACCACTCCTGAGTTGGATAAATCACGATAGCCTGGATAAAAGTACCGTT
GCACAATAGAAACTATAAGCGTCAATAGTCGCAAACTATCTGCCGAACCT
TAAATATCTTACCTACCTCTACAAGCTCATTCATTACGTATTATCGCATT
TTCCATTCTTCCTTATCACAGGAAAAATTAAATAAATCACCTTGTCGGGG
AATGTACATGTCACACCTGAGAACATGAATGATTTTCCCACCCTGGTGGA
ATTCCTGCACATTCCAAGGCGTGAAATGCTCTTTTCCCACCCTGGTGATC
AGCTCAATTTTTCTTGTTGATAGCTCCAGATGATAAGCATGCGTCCATCA
GTAACGTAAATAAAACCTGGGATAGAAGAGGAGGTTGCTACCTTCATGGT
TGCACGATCTAATGTAATTCTTTCTTGTAATTCTTCTGATCCAATAGAGC
AATGGAAGAAGATTATGCCATGCTATTAAGTGAAGAATATGAAGGAAAAC
ATTTGCCACCTCCTTCCAAACCTCAACCTGTTGATAAACCAATCATATTC
AATGATCTAGATTCTATACATCATAAAGGTATATTACAGTCCCTATAACT
CGAACCTTTATTACTTGGAATGTCTCCTTAACTCAAACATTATTTTGAAA
GATCTTATCTTTCCTTGATTTGAAGTAAAAACTGATACAAACATCCCATC
TTACAGCTTTGGTTGGACTTCTTCCCACAAGTAGGAAGAAAATTTCCATC
GAAATCCCGATTGGGATAGAAATCTTATGGTTTAAAGGACAAAGTCAAAA
TTAATTCTTTAGTTAATGATATATGATATAGAAGGGAACATGATCTCTTA
TGCTAACAAAACATTAAAACAATCCAATCGAATTTCTCAAAGTTTGTTCT
CGCGCGGTGCAGAAAGAAGAAAGAAAAGTTGATCTTTCTTTTTGTTTAAA
AATGCTGTGTAATCGAATAGTAGGAGGTACGTTAAATCATGTCGTATAAG
GATAGTCAAATACCAGCGAAACTTTTTTCTCACATTTTCAGGTGGTGACC
GAGTTGCTAAATTACTTTCGAAGAAGGTTCGAATTCTATGTTGGATCATG
ACGCAACCGAAAACATTGAAAACCAAAGCACAAGCTGTCAAGAACACGTG
GGGAAAACGTTGTAATACACTGCTGTTCATGAGTTCAAAGGGTGATAAAG
ATTTCCCAGTAGTTGGGCTGAACGTACCAGAAGGTAAAATCTCATTTGAT
GAGAATTTTATTTCAATATATTATATATAGAGAGGTTTATCTAAAGAATC
CTGCATTACTAAAAGTAACCAAAAGAACGACAAATTTCACCATTCATAAC
CCCGACAGAAAGTGACCACCCTTACATATTCATTCCTTTTTTATTATCAC
GGGAATTAACTACATGCGGTTTAAAAGAACGACAAATTATGCATGCGTGT
TACAATGCAGAATTCTTTAGAGGGACAGACTGATATTATTACCTGATATT
ATCTGATACCATATAGGTTCTATTCTTATTTTTATGTTTTGGACGTTAGA
TAGAAATTGTGTTGACGTTAGGCTTGGCTGGTAGTATCCTCTTATATGTT
CTGTTATAACTTATGATAAAAATTATCTTTGTATTATGCGCGGCCAACCT
TATTTTGGGCGGGGTTGGTTTCGCTAAGCTTTTCATGGTGTTTCAATGCA
GATTCTGGAGATGAGTTTGAAAAAAAAATTCACAGTGTACAAGCCAACCC
AGTTTCTTAACCACCTAGCCTGGTGTGTTGGCAAACGATATCATACTCCA
GGATGCAAGTGAAATTTTTCAATCCGCGGACGTAGACGGGGGTTTGGTTA
TTATCAGTTAGGATTAGCGTTGGAGCTCGAGAGTCACAATATCAGGCCGA
AGGCCTTCTTAGGGGCATTCGCACCCTGTGACTTAACTTTGGATCCCCTA
GGGATCCTTGTAGGGGCACCGGTAGGGTTGGGAGCTTTCTTAATTAAGGT
CTGTAAATTACACGTTATAAGTATTTGTGAATGACAGCTTTTTGTCGTGT
CTCGATGGCGCAAGCGGTTAGGCTGGTATGTAAACCAAGATTGCTTGCAT
TTGGTGGTTCGAGCCGGGGTCGATGACCTGTTTCACCGGTACGGGCAAAT
TTCAGAAAAATACTTAGAAAACGGTTAGAAACACTTGAGAACGATAGAAA
ATCAGGATAGAAGATAAGAAAGTAGAAAATAGGGGGAAAATAAGAGACGA
TGCATCCTGGAGTATGATATCGTTTGCCAACCTAGCCAACCACCTTCCAA
ACTTAGTCGGCGTCTCTTAGACTGTTTATTACCTGGCACGTTGGTAAAGT
CAGCACTATTTAGCACTTTTTATCTGTGTTTTCTTCTAATCTTGCTTTTA
TTTCTTTTCATCCAGGTCGAAAAAACTTGTGGTTGAAAACACGCGCAGCT
TGGAAATATATTTACGAGCACCATTTCTACGACGCTGATTGGTTCTTAAA
AGCCGATGATGACTCATTTGTCGTTCTCGAAAATCTACGTTATTTCTTAT
CAAAGCATAATTCAAGTCAGACTCATTATTTTGGGCGACATTTCCGCCCT
TTTGGCGGCTACAACTCTGGTGGGGCGGGCTATGTTTTCAGTAAAGCCAC
CCTGATAGTATTCAACCAAGTACTACGTGATCCAAGTGTTTGCAAACTAA
AAGCAGGCGCCGAGGATGCAGAAGTAGGCGTTTGTTTACGAATGATGGGC
GTTGTGCCCGGTGATACTAGAGACGAATTTGGGCGTGAAAGTTTCCACCC
GTTTGCGCCTGATTATCATTTAGTACCGAATGGTATACCCACTACGAACT
GGTTACATAAATATAATAAACATCCGGTCAAATCGGGACCTGGATGTTGT
TCAGACCATAGTATAGCTTTTCATTATATTCCGCCAAACCGGATGTATGT
GATGGAATATTTTATTTATCATTTGAGGCCGTTCGGTGTGCACCACGTAC
ACAACTGACATCATTCAGCCTAGTTTGCTACAAGTAGTGCTCTGAATGGT
GACATTGGGTTATTCTAGAAATACTCTGTATTTTGTTATCGTCTCCCTTT
TTACTTTACAAATAGTAGCTCTTATTAGAGCGTGATCAGTTCTGTTTACC
AATAATCCATTTCAACCGTGAAATTGTTCATCGGTATAGGGGGTTGTTAT
ATTGTTCTTGGAAGTAATAACATTCGAGAGATTCATCCCTGACGGAATAT
TTATAATTTTAAAATCGAAATTGATGGGAAATTGGTTCTGTTTTCATCAC
CATTTGAAATTCAATGGAAAAATATTGCATTCCAAAACCATCCCCACTTG
GGTTTTTGACCTTGATCCCCCTTTGGACTTCGATAGAAATGTTATCTCCA
CTGTTGTGGGAAGAAGTTCCACCGGGGCTGTGAGACATGTGTCATAAAGC
TTTTAACCAATGAGAGATTTTGGCACTGCCACTTGTGGCTTTTTATGAAT
ATCGATCAAGTTTATATTGTAGATATTTTTTGAATCAATTTATATAAAAG
TAAAGTGACTCTATATTTTTTAGTATTTTTAATAAATTATATGAAAATAT
AAAGGAATAACAAAAATTTAAAAATTCATACTCTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001114XLOC_001114Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002138-exon-sc0000018-1575043694:375603..375731TCONS_00002138-exon-sc0000018-1575043694:375603..375731Clytia hemisphaericaexon
TCONS_00002138-exon-sc0000018-1575043694:367897..368273TCONS_00002138-exon-sc0000018-1575043694:367897..368273Clytia hemisphaericaexon
TCONS_00002138-exon-sc0000018-1575043694:367054..367184TCONS_00002138-exon-sc0000018-1575043694:367054..367184Clytia hemisphaericaexon
TCONS_00002138-exon-sc0000018-1575043694:366399..366590TCONS_00002138-exon-sc0000018-1575043694:366399..366590Clytia hemisphaericaexon
TCONS_00002138-exon-sc0000018-1575043694:363997..365216TCONS_00002138-exon-sc0000018-1575043694:363997..365216Clytia hemisphaericaexon
TCONS_00002138-exon-sc0000018-1510915933:375603..375731TCONS_00002138-exon-sc0000018-1510915933:375603..375731Clytia hemisphaericaexon
TCONS_00002138-exon-sc0000018-1510915933:367897..368273TCONS_00002138-exon-sc0000018-1510915933:367897..368273Clytia hemisphaericaexon
TCONS_00002138-exon-sc0000018-1510915933:367054..367184TCONS_00002138-exon-sc0000018-1510915933:367054..367184Clytia hemisphaericaexon
TCONS_00002138-exon-sc0000018-1510915933:366399..366590TCONS_00002138-exon-sc0000018-1510915933:366399..366590Clytia hemisphaericaexon
TCONS_00002138-exon-sc0000018-1510915933:363997..365216TCONS_00002138-exon-sc0000018-1510915933:363997..365216Clytia hemisphaericaexon
TCONS_00002138-exon-sc0000018-1491911889:375603..375731TCONS_00002138-exon-sc0000018-1491911889:375603..375731Clytia hemisphaericaexon
TCONS_00002138-exon-sc0000018-1491911889:367897..368273TCONS_00002138-exon-sc0000018-1491911889:367897..368273Clytia hemisphaericaexon
TCONS_00002138-exon-sc0000018-1491911889:367054..367184TCONS_00002138-exon-sc0000018-1491911889:367054..367184Clytia hemisphaericaexon
TCONS_00002138-exon-sc0000018-1491911889:366399..366590TCONS_00002138-exon-sc0000018-1491911889:366399..366590Clytia hemisphaericaexon
TCONS_00002138-exon-sc0000018-1491911889:363997..365216TCONS_00002138-exon-sc0000018-1491911889:363997..365216Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000018supercontigsc0000018:363997..375731 -
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.86725	3.1776	1.58565	0	14.4809	13.6906	9.60258	16.7787	4.32711	1.3911	2.83766	1.1559	0.310462	1.72559	2.65072	1.70677	3.85478	3.23265	1.98493	1.55781	2.2567	5.28356	5.88762	4.37948	9.52293	14.7066	1.92028	0	1.03625	3.69521
Blast
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BLAST of TCONS_00002138 vs. Swiss-Prot (Human)
Match: C1GLT (Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 OS=Homo sapiens GN=C1GALT1 PE=1 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 5.698e-89
Identity = 146/340 (42.94%), Postives = 205/340 (60.29%), Query Frame = 1 
Query:  391 MAFLLGLSFGFFI-AVIFRELQSSFSETKDLVNKGPPSGRAMEEDYAMLLSEEYEGKHLXXXXXXXXXXXXIIFNDLDSIHHKGGDRVAKLLSKKVRILCWIMTQPKTLKTKAQAVKNTWGKRCNTLLFMSSKGDKDFPVVGLNVPEGRKNLWLKTRAAWKYIYEHHFYDADWFLKADDDSFVVLENLRYFLSKHNSSQTHYFGRHFRPF--GGYNSGGAGYVFSKATLIVFNQVLRDPSVCKLKAGAEDAEVGVCLRMMGVVPGDTRDEFGRESFHPFAPDYHLVPNGIPTTNWLHKYNKHPVKSGPGCCSDHSIAFHYIPPNRMYVMEYFIYHLRPFG 1401
            + FL G + GF + + +F  L     +T+  V    P  R  +++    L    EG+              + FN   S H      +A+ L +KVRILCW+MT P+ L+ KA+ VK TW +RCN +LFMSS+ +KDFP VGL   EGR  L+ KT  A++Y++EH+  DADWFLKADDD++V+L+NLR+ LSK++  +  YFGR F+P+   GY SGGAGYV SK  L  F    +    C   +  ED  +G C+ +M V  GD+RD  G+E+FHPF P++HL+   +P T W   YN +P   GPGCCSD +++FHY+    MY +EY +YHLRP+G
Sbjct:   10 LTFLCGSAIGFLLCSQLFSILLGEKVDTQPNVLHNDPHARHSDDNGQNHL----EGQ--------------MNFNADSSQHKDENTDIAENLYQKVRILCWVMTGPQNLEKKAKHVKATWAQRCNKVLFMSSEENKDFPAVGLKTKEGRDQLYWKTIKAFQYVHEHYLEDADWFLKADDDTYVILDNLRWLLSKYDPEEPIYFGRRFKPYVKQGYMSGGAGYVLSKEALKRFVDAFKTDK-CTHSSSIEDLALGRCMEIMNVEAGDSRDTIGKETFHPFVPEHHLIKGYLPRTFWYWNYNYYPPVEGPGCCSDLAVSFHYVDSTTMYELEYLVYHLRPYG 330
The following BLAST results are available for this feature:
BLAST of TCONS_00002138 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
C1GLT5.698e-8942.94Glycoprotein-N-acetylgalactosamine 3-beta-galactos... [more]
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