TCONS_00002449 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002449
Unique NameTCONS_00002449
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1903

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002449 ID=TCONS_00002449|Name=TCONS_00002449|organism=Clytia hemisphaerica|type=transcript|length=1903bp
AAACTTTTTCAATTGAAAagagtattttaatttttgtttttctgaaaTGG
AGGTTTTTTACTCTTCTTCTTAGTTTATATTTCTCACCATTCACTTCTGT
CAGCTTCTGTTACTAAGTTACAAATTGTTGGTTATTTGTTGTCCATTTTT
TTTCCTCACGGTTATTTACCTAGGTCTGGTTCAGTTTTTTTCCAgtctga
aaatgaagaaagataCACCCAGAAGACAAACCAGAGCCTCTTCAAGGCTA
AAAGAAAAACACGTAGAAACAATAGAAGaagaGAGCTTTGTAGAAGACCA
ACAAAACACAACTTTggtaaagaaatcaaaatcaaagaaagattCAGTCG
AAGATTTCCCAAAAGctATAGATAAAGTTGGAGGTACCCAACAAGAAGCA
CAAATAGAGGCGTCACCTACGAAAAAGAGGAAGAccaaaaaagacaaaga
aaaatcactTGAGATAACAGAGATTGATGAAACACAAGAAGATGCAGAAA
AGGAAACACAGGATTCTCCAACAAAAAAGAGgaagaacaaaaaaaacaaa
gaaaatgtaacTGAGGCTGAAGAAATGAATGATACAGGAAAGAATATCAA
TGAATCACCAGTGAAAAAGAGCAGGAAAACcagaaaagcaaaagaaaaat
caCCGGAGTTTGTTCAAGATGATGATATTCAAGAAGATACATTAGaagaa
aagTCACCAGTGAAAAAAGGCAagaaaggaagaaaaacaaaagagaaatC
ACTTGAGTTTGTTGAAGATGACAAACCAGACGAACATACAGAGCCACAAA
TTACAGAAGAATCGTCAGTGAAAAAGAGCCGGAACAAtaaaaacagtaaa
gaaaaaaaatcagatgCTGTAACAAGTGAAGACATAGCAGAAGAAGAGCT
ACAAATAAAGGAATCCCctgtgaagaagaagaaaaggaaatcACCTAGAC
AGGACAAAGAACAAATATCAGAGATCACTGAGGATGATGCCAATGACAAA
GAAatagAGGATGAACCAATAGAAACTAAAGTTGAATTGAATAATTCACC
ACCAACAGACTCTGAAGATGAAGCTCCCGAGGGGATTTCTTTAAAAGACA
GTCGTAAGAAAGCTATACAAATTCAACAAGACATCTCTGAtgctaaaaaa
ttgaaaaaatcacatcaAAAACAAGTGGTCCAAGATCGCCAAAAGAAAAA
TCGTCAACAGCAAGAAAAGTCTAAGAAGAAAAGCCATCAGTTACCGGATA
AGATTTCAGAGGATGTTTTGAAATTAGTACAGCAAGAGGCTGAAGAGGAG
CAAAATTCAGATTCTGAAATGGATATAGATGAACTGTTAAACCAAATAGG
TCAAGAGAAACCTGCATTTAAAACACAacctaaaaatcagaaaattactT
TTGAAGATGACGATGATCCTGGTTTTGATGAACAATTTCTTGATGAAGAG
AGTGAGGATGACTTAGAATCAGGTTTACAAGCACCAATAACAGCACAGCA
TTTGTATTCCGTAGATAAGGTCAAAGATATTGGTACTGATGCAAGAGAGT
TTCTACAGCAACACTTTTTCGGTAAAAGACTCAAACGAGAAAAGAGATTA
AAATccaatttcaaacaaaaagttGGGTCGAAAAAGTCTAAACAAATTGG
TAAAAGGAAAAAGATTATATGATgtagttttttttgtaaatgtttttata
gttttataacattgattattttattttactaaCTTTATACATTTATAACC
TAAATGTGCAATTGATTTTATAAGAGGCTAAATATATCACAAAAGTTTGC
TCCGGGATCgtgtcaaaattaaaaagtatttAAAGTAAGatctgagaaaa
ttttttccctATTGTATTATGGGAGAATTGGAAAAGTTTGTACATCTCTG
GTG
Run BLAST on NCBI

transcript from alignment at sc0000020:481691..492283+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002449 ID=TCONS_00002449|Name=TCONS_00002449|organism=Clytia hemisphaerica|type=transcript|length=10593bp|location=Sequence derived from alignment at sc0000020:481691..492283+ (Clytia hemisphaerica)
AAACTTTTTCAATTGAAAagagtattttaatttttgtttttctgaaaTGG
AGGTTTTTTACTCTTCTTCTTAGTTTATATTTCTCACCATTCACTTCTGT
CAGCTTCTGTTACTAAGTTACAAATTGTTGGTTATTTGTTGTCCATTTTT
TTTCCTCACGGTTATTTACCTAGGTCTGGTTCAGTTTTTTTCCAgtctga
aaatgaagaaagataCACCCAGAAGACAAACCAGAGCCTCTTCAAGGCTA
AAAGAAAAACACGTAGAAACAATAGAAGGTGAGCCATTGAAAtagatttc
tttgattttttctccaaaacaCTATATATCTGAACTAATGTTACAAATGC
TAATTGGCATACCTTATCCGGGAAAAATGTTAGGGaaagtgtcaaaattt
ttcatGGGTGTCAGTATTTTACTTGTCTAAAAACCTGAGGTTCCAtcatt
tgaaaaagccttgcTCGGATTATTTATCACTGGTCCCTGGATCACTTTTA
CCTGATTTCTTATTATTGTCAATTTCTGGTTTCTCTTgggtaaaaaaatc
atttttgatccCTTGCATTAAtgcatttaaaaatgattttaaaatgatat
ttttttgtgatactttttcttttttagaagaGAGCTTTGTAGAAGACCAA
CAAAACACAACTTTggtaaagaaatcaaaatcaaagaaagattCAGTCGA
AGATTTCCCAAAAGGTAATAAAATAATCGATTGGTTTCAAAACTCTTTTT
ATGGTTTTTTAGAATTATTAAATCAGcaaaatcagtttttaactCTCACC
AATATTTGAGAGATATGACTTCATTTGGAGCTTTAAAAAAGAGTTTTTCA
AAGTagctcatttttttctttccataaATATGTTTGAatgtagcctggag
atccatgctatgattacTTCTTTTATATAAAGATGGAGAAATGAATTGCA
TGGTTTNATCCATGCTATGATTACTTCTTTTATATAAAGATGGAGAAATG
AATTGCATGGTTTGGGCTATGAGTTTGAATTTTCCAGCTCCAAAAGGACC
AGTTGAAAACACAGCTAATCAAATCTTGTTACTATTTACTATTCTTTTAA
GTTGCtttaattttagtaagtgaggaaaGCGCTAAATTCCAAGATTTCTT
AGATTCGTCCTCACAGCCTGAACCCATCATGTATACATAAATACAGGACA
GGTCTCCTGTGTCTAGTTTGAATAATACTTCTAAATAAAACAGCACTGAA
TGTTCTATGTCAAAATTAACTTGCTTACATTTTCTGACCGTTCAGATGAA
AttctgtagaaaaaaaactttcattttagTTAATAGAATGAAAGAGAAAT
CCTTTGATTTCACTATGTGAATCAACACTTGTACTCATTTTTAATCATTC
AGCCAATGTGTTATCTGAATTGTTTtcgtagaaaaaatctttatctcGTC
AGATCTCGTTGTGTatcaaaattaccaaaataaattgaaaaatatcttat
cGTAGCCCATTATTGCTCTGTGTACTGTATGATTAAATGAAatatatgat
ctcttttaagctATAGATAAAGTTGGAGGTACCCAACAAGAAGCACAAAT
AGAGGCGTCACCTACGAAAAAGAGGAAGAccaaaaaagacaaagaaaaat
cactTGAGATAACAGAGATTGATGAAACACAAGAAGATGCAGGTAATTTT
GATTATTGTTCTTCATCAGATCTATTGTCTCTTTTTTATTATGCCCCTTT
AAAGTGTGAAAAGACTGGGTTAGTTTACAATGCAGGATTGAAATCAAATG
TTTGAAGTTGTTGCATTTATTTTCGCATTAAAACATAATTTTGACATGGT
TCCTTgccaataaaaatttgaatgaaagaaAAATCCATTGATTTCACTAT
GTGAATCAACACTTCCACTAATTTTTAATCAATCAGCCAATGTGTTATCT
GaattgttttcttaaaaaaatctttatctcGTTGTGTATTATAATGacca
aaataaattgaaaaatatcttatcGTAGCCCATTATTGCTCTGTGTATCG
TAAGATTAAATGAAatatatgatctcttttaagctATAGATAAAGTTGGA
GGTACCCAACAAGAAGCACAAATAGAGGCGTCACCTACGAAAAAGAGGAA
GAccaaaaaagacaaagaaaaatcactTGAGATAACAGAGATTGATGAAA
CACAAGAAGATGCAGGTAATTTTGATTATTGTTCTTCATCAGATCTATTG
TCTCTTTTTTATTATGCCCCTTTAAAGTGTGAAAAGACTGGGTTAGTTTA
CAATGCAGGATTGAAATCAAATGTTTGAAGTTGTTGCATTTATTTTCGCA
TTAAAACATAATTTTGACATGGTTCCTTgccaataaaaatttgaatgaaa
gaaAAATCCATTGATTTCACTATGTGAATCAACACTTCCACTAATTTTTA
ATCAATCAGCCAATGTGTTATCTGaattgttttcttaaaaaaatctttat
ctcGTTGTGTATTATAATGaccaaaataaattgaaaaatatcttatcGTA
GCCCATTATTGCTCTGTGTATCGTAAGATTAAATGAAatatatgatctct
tttaagctATAGATAAAGTTGGAGGTACCCAACAAGAAGCACAAATAGAG
GCGTCACCTACGAAAAAGAGGAAGAccaaaaaagacaaagaaaaatcact
TGAGATAACAGAGATTGATGAAACACAAGAAGATGCAGGTAATTTTGATT
ATTGTTCTTCATCAGATCTATTGTCTCTTTTTTATTATGCCCCTTTAAAG
TGTGAAAAGACTGGGTTAGTTTACAATGCAGGATTGAAATCAAATGTTTG
AAGTTGTTGCATTTATTTTCGCATTAAAACATAATTTTGACATGGTTCCT
TgccaataaaaatttgaatgaaagaaAAATCCATTGATTTCACTATGTGA
ATCAACACTTCCACTAATTTTTAATCAATCAGCCAATGTGTTATCTGaat
tgttttcttaaaaaaatctttatctcGTTGTGTATTATAATGaccaaaat
aaattgaaaaatatcttatcGTAGCCCATTATTGCTCTGTGTATCGTAAG
ATTAAATGAAatatatgatctcttttaagctATAGATAAAGTTGGAGGTA
CCCAACAAGAAGCACAAATAGAGGCGTCACCTACGAAAAAGAGGAAGAcc
aaaaaagacaaagaaaaatcactTGAGATAACAGAGATTGATGAAACACA
AGAAGATGCAGGTAATTTTGATTATTGTTCTTCATCAGATCTATTGTCTC
TTTTTTATTATGCCCCTTTAAAGTGTGAAAAGACTGGGATAGTTTACAAT
GTAGGATTGATATCAAATGTTTAAAGGTGTTGCATTTATTTTCGCATTGA
AACATAATTGTTCCTTTCTAATAAAAACGCGACCAAATTCCTTCTTATTT
TTCATTGTAATGAGTTATTTAGTCAGAacaatgacaacaaagtttCTCAA
TACCCTGATAAAATTGTCATTGTTGCCTGATAATAATATTGTTCATTTAG
AAAAGGAAACACAGGATTCTCCAACAAAAAAGAGgaagaacaaaaaaaac
aaagaaaatgtaacTGAGGCTGAAGAAATGAATGATACAGGTAGAAAACT
AGATTTGTCCATTGTTTTTTGCTTTTGTTGCGCAAGGTCAACAGACCCAA
AGCCTTTTCAAATTCAGAGCAACTAAAATCACTCCCTAGTCAAGGTACCC
TTAAATAAactaagtttttttcaaaacctgaaTAAAGGAGAACAAAGCTG
GCAAAAAAGGTTAGGTGCTTAGCCTGTATAAAGATAAAAGAATAAAGTGA
ATTTTTAAATGCCATTTTGTCACTTCGAATTTTCGAATATTATTTAATTT
CAACTAAGGAAAGGTTgttattctcatttttttaaACAGGATAGCACTGG
ACTTGGCAGCCCTAGGTCCTAACTTACCAGTACAGAACTGTAACAAAATC
TCGCGTGGTACCACTTTAGACTCTATTTCTTTTAACCAGGAAAGAATATC
AATGAATCACCAGTGAAAAAGAGCAGGAAAACcagaaaagcaaaagaaaa
atcaCCGGAGTTTGTTCAAGATGATGATATTCAAGAAGATACATTAGGTA
TGGGgctgtccacatagtacgtacgcactaaagggggaggggggtcttct
caaaagtgTATGAAAAGCGAGTTAAAGAAAAATGTATGTACGCattgtaa
agaaaaatttttgtttttttgtcgacttttacacTTCTTATCTgttctta
tacgcatcaaggaatagaaaaagtttcttaataaacaacaagtttcatgt
atgaaatgaAGATCcaaaccaaacgatttgaatttaaaattttcttcaac
cgaggggggcGGGGGGGGAGTTATGAAAAAGTACGTTTTTTACcaggggt
atagccatttgcgtacaaGGGGTACCCCCtgtactcgattttcgacattt
tagtgcgtacatACAATGTGGAAGGCCCCTATGCAATATTTAATAAGATC
CTTATCCAAAGAATCTGACTGTAACTATTTTCTGTTGTATGGCTGGCAAC
GGATCAAGTTAACACCTGCCAAGTAAAATTCAAAACTGCGTAAGGCCTAC
CCTCTTcgtttgtctgttaccagcttttttttggtattggttctttgtta
gtttttttgtacaaagatatggaaaaatTGGTAATAACTGAgctccattt
tcaaaaaaaagttttttgcttgccaaaaaatgtcaaaatatgcGGAAGTT
cgttattttagattttcaaagatttttttttNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTTTTACACT
TCTTATCTgttcttatacgcatcaaggaatagaaaaagtttcttaataaa
caacaagtttcatgtatgaaatgaAGATCcaaaccaaacgatttgaattt
aaaattttcttcaaccgagggggggggggggggagttaTGAAAAAGTACG
TTTTTTACcaggggtatagccatttgcgtacaaGGGGTACCCCCtgtact
cgattttcgacattttagtgcgtacatACAATGTGGAAGGCCCCTATGCA
ATATTTAATAAGATCCTTATCCAAAGAATCTGACTGTAACTATTTTCTGT
TGTATGGCTGGCAACGGATCAAGTTAACACCTGCCAAGTAAAATTCAAAA
CTGCGTAAGGCCTACCCTCTGcgtttgtctgttaccagcttttttttggt
attggttctttgttagtttttttgcacaaagatatggaaaaatTGGTAAT
AACTGAgctccattttcaaaaaaaagttttttgcttgccaaaaaatgtca
aaatatgcGGAAGTTcgttattttagattttcaaagatttttttttaatc
aattctACCATCCTAGAAATTGGAGGGAGCAGCCAATTGTCGCCACTATA
ATGATTTTTCTTGATATTCTCTGTACTCATTGAATTTACCGATTTTTTCT
TCCTTAATCTTCATTTAGCATGgtttaattttcataaaaaaattattttc
aatcacTTGATGtacagccagtaaaatttatTTGAGCCTTCTTTCTCCTT
TTTCTCTTCGTCTTTTTGACATCAGGTcttcatcaggtaggtccaatcaa
CATCCAtccattattattattttcagaagaaaagTCACCAGTGAAAAAAG
GCAagaaaggaagaaaaacaaaagagaaatCACTTGAGTTTGTTGAAGAT
GACAAACCAGACGAACATACAGGTATAAGCATGACATATTGTGCACTGAA
AAAGCAGCAATTATAATAGCATGCCATATTTCGGAAAGGATTAAATTAGG
ACTGTCATTTTttcttctgttattttattCTGTTGTCAactcagcgtttt
gattggtcgagagcatcgagatatttgtgatatttaaaatatttcacatG
TGGAAAATATGACTACGTTGACTTTCGGGGGCTGCGTGAGCGgtgggaga
aaaatcaaaacaaaacagccgaaaagaactgactaaagaaaaaataaaga
tcagCAAAAAGATTATTTGCAGATTAATTTTTTACTTTGGATTTCTTCCA
TTAGAGACactaaaatgggggggggggtttgtaggggttcgaaataccgt
tttcccgtcaaaatttttgctgaatcccggaatcccgaaaattgaaaaaa
taataacaccgtcacaccagCTTGTACAGGGaaaaaatgtacctaaatac
cgtcagcttctgattttaaaataccgttttcccgtctcttttttcgtcaa
atcccgtataataccgtactaaaaaagggccaatcccgtcacaccgtaaa
agtacaaacccccctctaaaatcaaatctaatgaaatgtaaaagtaaaaa
attaaataaaagtagaatttcatctaaaaaatctcctaaaaagacagcaa
aaatttagatttttgaaatttcagggtcggtcgggcccatAAAACAAACT
AATTAAATTGGTCTTGCCTAATAATACTTTCATTTAATATTATTTAAGAG
CCACAAATTACAGAAGAATCGTCAGTGAAAAAGAGCCGGAACAAtaaaaa
cagtaaagaaaaaaaatcagatgCTGTAACAAGTGAAGACATAGCAGGTA
AAGCACTGTTCTTTGTAATACTTCTTTATAATGGCTTTGTTGTCAGTCAA
CATAGATTCGACATGGAAGTGTGAGGGTATGCAGTCTAATATCAAAGAAA
CGAAAATGGAACATAATCTACATACAAAAGATTTTCTACTAAACTATAGG
TTATCTGTTACGCTCCTCTTGACATACCAAAAATTATGTTCACAATTTAA
CTCTTTTTAGAAGAAGAGCTACAAATAAAGGAATCCCctgtgaagaagaa
gaaaaggaaatcACCTAGACAGGACAAAGAACAAATATCAGAGATCACTG
AGGATGATGCCAATGACAAAGAAataggttttgtttttttatatttataa
aaggGTTTAGGTTTAATTTCACTATCGGAATCAGAAGACGACCTATGATG
GTCTCATCTTCTTAAATTCCTCCTTAAGATAGAGGGGACTTGAACGATGT
TGATTAGAATTACCCTATAAGAATAGATGTCAAAGATGGGTTAAAGGGaa
attaaagtagtaaaatgtaaacattgcgcgaaccacgtgtcattaaagag
aacaattgagatcacgtgtccaaaacaaacttgtaagacaattgaacaat
caaaataattagccatatttggtttgattttgtatccgctgcatacagtt
tgtttacaaatttcgcaagtactgttatgtccctttaatatgGTGAAGGT
TTTGCCAGTGATATGGTGTCTTTTTTCAATCTCCGATTGGGTCATTAAAT
CATCaagtttcgatatttttataagaaaggttATTCACTCGCAAGGGGAC
GGGTGTAGTTTAAAATTTATTGTACAAAAAAGTTAATCCTACCATGGTCT
TTTTTGATTCGATCGATATTGATCAAAACGAACCAGGGAGaaagagtaaa
aaaaactttcaaaaaacctAAAGAAACATCGCCTGGAATTTATGAAGCTG
AACAATCAAATGCTATtgaatttgattgattgatatgaATATTAATTTTT
AGCTTCAGTTGAACTATATAAGGGAACAAAATTATGCGGAATGAAAATTT
GGTGGAAATAccaccaaaattaaattcccgccaaatttaaaatatttttt
tcccgaATGAGTATTATTtcagtctttaaaaaaaacgttctttctcattt
aaaaaaaaagcgcCAAAAATATCCTTCATCTGCCAAAGGAAATTCCCAAC
GAAAATAATGTTTTCGGCCATccaacaaattaaattcctgctcAAATTTC
TTCCTTGAGTTAGAATCTAAAAGTGACAGTTTCTAATGACTAATATGGTT
TGCCATTACATTATTCTTTAACTCTTTCAGAGGATGAACCAATAGAAACT
AAAGTTGAATTGAATAATTCACCACCAACAGACTCTGAAGATGAAGCTCC
CGAGGGGATTTCTTTAAAAGACAGTCGTAAGAAAGCTATACAAATTCAAC
AAGACATCTCTGAtgctaaaaaattgaaaaaatcacatcaAAAACAAGTG
GTCCAAGATCGCCAAAAGAAAAATCGTCAACAGCAAGAAAAGTCTAAGAA
GAAAAGCCATCAGTTACCGGATAAGATTTCAGAGGATGTTTTGAAATTAG
TACAGCAAGAGGCTGAAGAGGAGCAAAATTCAGATTCTGAAATGGATATA
GATGAACTGTTAAACCAAATAGGTCAAGAGAAACCTGCATTTAAAACACA
acctaaaaatcagaaaattactTTTGAAGATGACGATGATCCTGGTTTTG
ATGAACAATTTCTTGATGAAGAGAGTGAGGATGACTTAGAATCAGGTTTA
CAAGCACCAATAACAGCACAGCATTTGTATTCCGTAGATAAGGTCAAAGG
CNGACTTAGAATCAGGTTTACAAGCACCAATAACAGCACAGCATTTGTAT
TCCGTCAGGGTCAAAGATATTGGTACTGATGCAAGAGAGTTTCTACAGCA
ACACTTTTTCGGTAAAAGACTCAAACGAGAAAAGAGATTAAAATccaatt
tcaaacaaaaagttGGGTCGAAAAAGTCTAAACAAATTGGTAAAAGGAAA
AAGATTATATGATgtagttttttttgtaaatgtttttatagttttataac
attgattattttattttactaaCTTTATACATTTATAACCTAAATGTGCA
ATTGATTTTATAAGAGGCTAAATATATCACAAAAGTTTGCTCCGGGATCg
tgtcaaaattaaaaagtatttAAAGTAAGatctgagaaaattttttccct
ATTGTATTATGGGAGAATTGGAAAAGTTTGTACATCTCTGGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001309XLOC_001309Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002449-exon-sc0000020-1491911889:481691..481968TCONS_00002449-exon-sc0000020-1491911889:481691..481968Clytia hemisphaericaexon
TCONS_00002449-exon-sc0000020-1510915933:481691..481968TCONS_00002449-exon-sc0000020-1510915933:481691..481968Clytia hemisphaericaexon
TCONS_00002449-exon-sc0000020-1575043694:481691..481968TCONS_00002449-exon-sc0000020-1575043694:481691..481968Clytia hemisphaericaexon
TCONS_00002449-exon-sc0000020-1491911889:482318..482404TCONS_00002449-exon-sc0000020-1491911889:482318..482404Clytia hemisphaericaexon
TCONS_00002449-exon-sc0000020-1510915933:482318..482404TCONS_00002449-exon-sc0000020-1510915933:482318..482404Clytia hemisphaericaexon
TCONS_00002449-exon-sc0000020-1575043694:482318..482404TCONS_00002449-exon-sc0000020-1575043694:482318..482404Clytia hemisphaericaexon
TCONS_00002449-exon-sc0000020-1491911889:483251..483294TCONS_00002449-exon-sc0000020-1491911889:483251..483294Clytia hemisphaericaexon
TCONS_00002449-exon-sc0000020-1510915933:483251..483294TCONS_00002449-exon-sc0000020-1510915933:483251..483294Clytia hemisphaericaexon
TCONS_00002449-exon-sc0000020-1575043694:483251..483294TCONS_00002449-exon-sc0000020-1575043694:483251..483294Clytia hemisphaericaexon
TCONS_00002449-exon-sc0000020-1491911889:483818..483905TCONS_00002449-exon-sc0000020-1491911889:483818..483905Clytia hemisphaericaexon
TCONS_00002449-exon-sc0000020-1510915933:483818..483905TCONS_00002449-exon-sc0000020-1510915933:483818..483905Clytia hemisphaericaexon
TCONS_00002449-exon-sc0000020-1575043694:483818..483905TCONS_00002449-exon-sc0000020-1575043694:483818..483905Clytia hemisphaericaexon
TCONS_00002449-exon-sc0000020-1491911889:485241..485330TCONS_00002449-exon-sc0000020-1491911889:485241..485330Clytia hemisphaericaexon
TCONS_00002449-exon-sc0000020-1510915933:485241..485330TCONS_00002449-exon-sc0000020-1510915933:485241..485330Clytia hemisphaericaexon
TCONS_00002449-exon-sc0000020-1575043694:485241..485330TCONS_00002449-exon-sc0000020-1575043694:485241..485330Clytia hemisphaericaexon
TCONS_00002449-exon-sc0000020-1491911889:485730..485837TCONS_00002449-exon-sc0000020-1491911889:485730..485837Clytia hemisphaericaexon
TCONS_00002449-exon-sc0000020-1510915933:485730..485837TCONS_00002449-exon-sc0000020-1510915933:485730..485837Clytia hemisphaericaexon
TCONS_00002449-exon-sc0000020-1575043694:485730..485837TCONS_00002449-exon-sc0000020-1575043694:485730..485837Clytia hemisphaericaexon
TCONS_00002449-exon-sc0000020-1491911889:489017..489112TCONS_00002449-exon-sc0000020-1491911889:489017..489112Clytia hemisphaericaexon
TCONS_00002449-exon-sc0000020-1510915933:489017..489112TCONS_00002449-exon-sc0000020-1510915933:489017..489112Clytia hemisphaericaexon
TCONS_00002449-exon-sc0000020-1575043694:489017..489112TCONS_00002449-exon-sc0000020-1575043694:489017..489112Clytia hemisphaericaexon
TCONS_00002449-exon-sc0000020-1491911889:489889..489987TCONS_00002449-exon-sc0000020-1491911889:489889..489987Clytia hemisphaericaexon
TCONS_00002449-exon-sc0000020-1510915933:489889..489987TCONS_00002449-exon-sc0000020-1510915933:489889..489987Clytia hemisphaericaexon
TCONS_00002449-exon-sc0000020-1575043694:489889..489987TCONS_00002449-exon-sc0000020-1575043694:489889..489987Clytia hemisphaericaexon
TCONS_00002449-exon-sc0000020-1491911889:490201..490317TCONS_00002449-exon-sc0000020-1491911889:490201..490317Clytia hemisphaericaexon
TCONS_00002449-exon-sc0000020-1510915933:490201..490317TCONS_00002449-exon-sc0000020-1510915933:490201..490317Clytia hemisphaericaexon
TCONS_00002449-exon-sc0000020-1575043694:490201..490317TCONS_00002449-exon-sc0000020-1575043694:490201..490317Clytia hemisphaericaexon
TCONS_00002449-exon-sc0000020-1491911889:491321..491839TCONS_00002449-exon-sc0000020-1491911889:491321..491839Clytia hemisphaericaexon
TCONS_00002449-exon-sc0000020-1510915933:491321..491839TCONS_00002449-exon-sc0000020-1510915933:491321..491839Clytia hemisphaericaexon
TCONS_00002449-exon-sc0000020-1575043694:491321..491839TCONS_00002449-exon-sc0000020-1575043694:491321..491839Clytia hemisphaericaexon
TCONS_00002449-exon-sc0000020-1491911889:491907..492283TCONS_00002449-exon-sc0000020-1491911889:491907..492283Clytia hemisphaericaexon
TCONS_00002449-exon-sc0000020-1510915933:491907..492283TCONS_00002449-exon-sc0000020-1510915933:491907..492283Clytia hemisphaericaexon
TCONS_00002449-exon-sc0000020-1575043694:491907..492283TCONS_00002449-exon-sc0000020-1575043694:491907..492283Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000020supercontigsc0000020:481691..492283 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.40881	3.74997	0.982912	1.6455	21.535	20.2278	4.18456	10.843	1.0909	0	0	0.314085	1.3697	1.65613	3.18682	1.97777	1.19243	2.19449	0	1.27915e-06	1.8088	1.09413	4.28843	4.05485	7.63255	12.2722	1.01284	0.511523	3.93671	3.95639
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002449 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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