TCONS_00001336-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00001336-protein
Unique NameTCONS_00001336-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length494

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00001336-protein ID=TCONS_00001336-protein|Name=TCONS_00001336-protein|organism=Clytia hemisphaerica|type=polypeptide|length=494bp
MASSSMASSIPESTSSVDSSSDNEEMRITQEQREYYTNQFKSLQPNEDDV
IKGPQARDFFLKSNLAMETLSKIWHLSDLDKDGALNLEEFQIAMHLVVLI
KHGYELPMVLPPSLLGQEQVHQMASQDGVDMSDEDEKLISDDEKQESGDW
SAEFDATDGAPIDRGERIVQTYAQPSPTSVTVPSETRVQPVSHMIEQQQI
NHDDENELPSSPGALASPNDVAAAGGKMTAIARPRVTANKNVNLMDASPW
QLLPPPSGKTGKFGGPNGGTTAKKALKMDSVDSELDSAGVISDSENNKLV
SIDNHMSQTTSPTNGDSSLDNLDDDEHLTDDHDHERLKVKKKDSAYFRNL
SKEKSRSIDSLRSDISESSMFEWKRQSIRRESRPRSFTGESTHDTPQFES
PPVPPPRTNKGHARASSLDFNQMFHNRSPRVSSEPKLQVTTPTDGTGKNP
PQKPPRSNPPSTSSTNNSSAAPTAAARPRSSKGDEYHRSRSLDV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000722XLOC_000722Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00001336TCONS_00001336Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000261EH_dom
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000261EH domainSMARTSM00027eh_3coord: 25..120
e-value: 3.8E-31
score: 119.5
IPR000261EH domainPFAMPF12763EF-hand_4coord: 28..123
e-value: 5.0E-15
score: 55.2
IPR000261EH domainPROSITEPS50031EHcoord: 32..121
score: 18.938
NoneNo IPR availableGENE3D1.10.238.10coord: 9..127
e-value: 2.2E-16
score: 59.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..160
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..34
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 247..494
NoneNo IPR availableCDDcd00052EHcoord: 36..99
e-value: 3.81289E-23
score: 91.8974
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 78..90
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 65..100
score: 11.11
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 24..115

Blast
[Close]
BLAST of TCONS_00001336-protein vs. Swiss-Prot (Human)
Match: REPS1 (RalBP1-associated Eps domain-containing protein 1 OS=Homo sapiens GN=REPS1 PE=1 SV=3)

HSP 1 Score: 114.39 bits (285), Expect = 7.011e-27
Identity = 58/115 (50.43%), Postives = 76/115 (66.09%), Query Frame = 0 
Query:    1 MASSSMASSIPESTSSVDSSSDNEEMRITQEQREYYTNQFKSLQPNEDDVIKGPQARDFFLKSNLAMETLSKIWHLSDLDKDGALNLEEFQIAMHLVVLIKHGYELPMVLPPSLL 115
            +AS++ A  I   +SS D     +  +IT EQR+YY NQFK++QP+ +  I G  A++FF KS L +  LS IW LSD DKDGAL L+EF  A HLVV  K+GY+LP  LP SL+
Sbjct:  259 VASATTAIEIRRQSSSYD-----DPWKITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHIWELSDFDKDGALTLDEFCAAFHLVVARKNGYDLPEKLPESLM 368
The following BLAST results are available for this feature:
BLAST of TCONS_00001336-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
REPS17.011e-2750.43RalBP1-associated Eps domain-containing protein 1 ... [more]
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