TCONS_00002260-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002260-protein
Unique NameTCONS_00002260-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length172

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002260-protein ID=TCONS_00002260-protein|Name=TCONS_00002260-protein|organism=Clytia hemisphaerica|type=polypeptide|length=172bp
MTSKSAIRQNYNGDCEALVNKHANMELYASYLYTSLSFHFDRSDISSHGY
SQFFKKMSTKKSSAAHEFLKYQNKRGGRVCFQDISTPPVEWKTPDDALQE
SLEIEKRINAHLIALKSTADANKDAHLEHFLDGHIDSVVECINTFGHLIT
NLKRCGTGLGGYQFDHLTMEKM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001195XLOC_001195Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002260TCONS_00002260Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012347Ferritin-rel
IPR008331Ferritin_DPS_dom
IPR009040Ferritin-like_diiron
IPR009078Ferritin-like_SF
Vocabulary: Biological Process
TermDefinition
GO:0006879cellular iron ion homeostasis
Vocabulary: Molecular Function
TermDefinition
GO:0008199ferric iron binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006879 cellular iron ion homeostasis
molecular_function GO:0008199 ferric iron binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012347Ferritin-relatedGENE3D1.20.1260.10coord: 1..172
e-value: 4.2E-48
score: 163.1
IPR008331Ferritin/DPS protein domainPFAMPF00210Ferritincoord: 17..154
e-value: 1.8E-22
score: 79.7
IPR009040Ferritin-like diiron domainPROSITEPS50905FERRITIN_LIKEcoord: 9..156
score: 25.281
NoneNo IPR availableCDDcd01056Euk_Ferritincoord: 14..167
e-value: 8.08725E-53
score: 166.565
IPR009078Ferritin-like superfamilySUPERFAMILY47240Ferritin-likecoord: 4..169

Blast
[Close]
BLAST of TCONS_00002260-protein vs. Swiss-Prot (Human)
Match: FRIL (Ferritin light chain OS=Homo sapiens GN=FTL PE=1 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.695e-42
Identity = 74/171 (43.27%), Postives = 101/171 (59.06%), Query Frame = 0 
Query:    5 SAIRQNYNGDCEALVNKHANMELYASYLYTSLSFHFDRSDISSHGYSQFFKKMSTKKSSAAHEFLKYQNKRGGRVCFQDISTPPV-EWKTPDDALQESLEIEKRINAHLIALKSTADANKDAHLEHFLDGH-IDSVVECINTFGHLITNLKRCG---TGLGGYQFDHLTME 170
            S IRQNY+ D EA VN   N+ L ASY Y SL F+FDR D++  G S FF++++ +K       LK QN+RGGR  FQDI  P   EW    DA++ ++ +EK++N  L+ L +   A  D HL  FL+ H +D  V+ I   G  +TNL R G    GLG Y F+ LT++
Sbjct:    3 SQIRQNYSTDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREGYERLLKMQNQRGGRALFQDIKKPAEDEWGKTPDAMKAAMALEKKLNQALLDLHALGSARTDPHLCDFLETHFLDEEVKLIKKMGDHLTNLHRLGGPEAGLGEYLFERLTLK 173
The following BLAST results are available for this feature:
BLAST of TCONS_00002260-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FRIL1.695e-4243.27Ferritin light chain OS=Homo sapiens GN=FTL PE=1 S... [more]
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