TCONS_00002756-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002756-protein
Unique NameTCONS_00002756-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length358

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002756-protein ID=TCONS_00002756-protein|Name=TCONS_00002756-protein|organism=Clytia hemisphaerica|type=polypeptide|length=358bp
MSNPETIASVTILSLLMLTSLLGNGLTIIATLTNQKLRSITGLLICNLAV
SDLLISGINLPIRICQYFGINWSAGGISECRVSVAMTLFLFTASNTNLLL
ITADRYLGVTKPIKYRQKMNIKILRVVIAIGWFYSFIISVFPYFIVGGKT
DANDSVAVCTFQTVFTPAYILFIEFGTFFVPFFVMVGMYIKIIHKLVAPT
RIGIGSDNTNRNSVARCTHKEHRRKSVGGKTMTYRQEKKLAKGVFVILSV
YSISLIPIVIMEIIDVINQSPIIPLIAIKIAITIVYLNAAVNTPIYALSS
EKHREAFAKLLRIRAIDRERRRTEAKLSSNIGLSSASNGSAAPPVQRIEV
KEQSNDLV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001484XLOC_001484Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002756TCONS_00002756Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000276GPCR_Rhodpsn
IPR017452GPCR_Rhodpsn_7TM
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000276G protein-coupled receptor, rhodopsin-likePRINTSPR00237GPCRRHODOPSNcoord: 240..264
score: 16.98
coord: 87..109
score: 29.33
coord: 8..32
score: 25.69
coord: 123..144
score: 20.78
coord: 170..193
score: 23.44
coord: 41..62
score: 34.51
coord: 278..304
score: 24.95
IPR000276G protein-coupled receptor, rhodopsin-likeSMARTSM013817TM_GPCR_Srsx_2coord: 17..311
e-value: 1.8E-6
score: -13.9
IPR000276G protein-coupled receptor, rhodopsin-likePFAMPF000017tm_1coord: 23..296
e-value: 4.1E-48
score: 163.8
IPR000276G protein-coupled receptor, rhodopsin-likePROSITEPS00237G_PROTEIN_RECEP_F1_1coord: 93..109
NoneNo IPR availableGENE3D1.20.1070.10coord: 1..353
e-value: 1.4E-66
score: 224.1
NoneNo IPR availableSUPERFAMILY81321Family A G protein-coupled receptor-likecoord: 6..320
IPR017452GPCR, rhodopsin-like, 7TMPROSITEPS50262G_PROTEIN_RECEP_F1_2coord: 23..296
score: 35.698

Blast
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BLAST of TCONS_00002756-protein vs. Swiss-Prot (Human)
Match: ADA1A (Alpha-1A adrenergic receptor OS=Homo sapiens GN=ADRA1A PE=1 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.645e-31
Identity = 99/364 (27.20%), Postives = 177/364 (48.63%), Query Frame = 0 
Query:   12 ILSLLMLTSLLGNGLTIIATLTNQKLRSITGLLICNLAVSDLLISGINLPIR-ICQYFGINWSAGGISECRVSVAMTLFLFTASNTNLLLITADRYLGVTKPIKYRQKMNIKILRVVIAIGWFYSFIISVFPYFIVGGKTDANDSVAVCTFQTVFTPAYILFIEFGTFFVPFFVMVGMYIKIIHKLVAPTRIGIGSD-NTNRNSVARCTHKEHRRKSVGG---------------KTMTYRQEKKLAKGVFVILSVYSISLIPIVIMEIIDVINQSPIIPLIAIKIAITIVYLNAAVNTPIYALSSEKHREAFAKLLRIRAIDRERRRTEAKLSSNIGLSSASNGSAAPPVQRIEVKEQSNDLV 358
            IL  L+L  +LGN L I++   ++ L S+T   I NLAV+DLL++   LP   I +  G  W+ G +  C +  A+ +   TAS   L +I+ DRY+GV+ P++Y   +  +   + +   W  S +IS+ P F  G +  A +   +C  Q    P Y+LF   G+F++P  +++ MY ++       +R G+ S   T+++   + T + HR+ +  G               + + + +EKK AK + +++  + +  +P  ++  I              KI   + YLN+ +N  IY  SS++ ++AF  +LRI+ + R++    A     +G       +  PP Q +E   Q  D+V
Sbjct:   32 ILGGLILFGVLGNILVILSVACHRHLHSVTHYYIVNLAVADLLLTSTVLPFSAIFEVLGY-WAFGRVF-CNIWAAVDVLCCTASIMGLCIISIDRYIGVSYPLRYPTIVTQRRGLMALLCVWALSLVISIGPLF--GWRQPAPEDETIC--QINEEPGYVLFSALGSFYLPLAIILVMYCRVYVVAKRESR-GLKSGLKTDKSDSEQVTLRIHRKNAPAGGSGMASAKTKTHFSVRLLKFSREKKAAKTLGIVVGCFVLCWLPFFLVMPIGSFFPDFKPSETVFKIVFWLGYLNSCINPIIYPCSSQEFKKAFQNVLRIQCLCRKQSSKHA-----LGY------TLHPPSQAVE--GQHKDMV 375
The following BLAST results are available for this feature:
BLAST of TCONS_00002756-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ADA1A1.645e-3127.20Alpha-1A adrenergic receptor OS=Homo sapiens GN=AD... [more]
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