TCONS_00003487-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003487-protein
Unique NameTCONS_00003487-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length314

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003487-protein ID=TCONS_00003487-protein|Name=TCONS_00003487-protein|organism=Clytia hemisphaerica|type=polypeptide|length=314bp
DLEINDLKNTKIYRMSDGENQKSLFKLDGKWFHETGKVFPGQAMSLEVEE
VLFHQKSPYQDVLVFQSKTYGRVMVLDGMINSTSRDECAYQEMISFLPLN
SHPNPKSVLVVGGGDGGVARDCAKHSKVERITMIEIDQMVVDASKEFLPE
MAIGMSHPKVKLFVGDGLEYLENNEDTYDVIIADLSDPDDGGPAAKLFQE
TFYKLMKDRLNPGGIICAQGEVIWLDLEQCIKPMIDFCQKHFPSVTYACN
NVPTYTCGIIGYVICSLEKDKDFRTPLHVFTEEEMDQMNLKYYNQDMHTG
AFALPTFVKKKLNL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001939XLOC_001939Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003487TCONS_00003487Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001045Spermi_synthase
IPR030374PABS
IPR029063SAM-dependent_MTases
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.140.10coord: 14..84
e-value: 1.3E-25
score: 89.1
NoneNo IPR availablePFAMPF01564Spermine_synthcoord: 87..268
e-value: 4.6E-56
score: 189.1
NoneNo IPR availablePFAMPF17284Spermine_synt_Ncoord: 31..83
e-value: 1.3E-20
score: 72.9
NoneNo IPR availableGENE3D3.40.50.150coord: 85..314
e-value: 2.9E-42
score: 144.3
NoneNo IPR availableCDDcd02440AdoMet_MTasescoord: 129..219
e-value: 3.37377E-8
score: 48.9655
IPR001045Spermidine/spermine synthasesTIGRFAMTIGR00417TIGR00417coord: 31..307
e-value: 2.8E-93
score: 310.0
IPR001045Spermidine/spermine synthasesHAMAPMF_00198Spermidine_synthcoord: 30..313
score: 32.926
IPR030374Polyamine biosynthesis domainPROSITEPS51006PABS_2coord: 29..267
score: 81.633
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 30..312

Blast
[Close]
BLAST of TCONS_00003487-protein vs. Swiss-Prot (Human)
Match: SPEE (Spermidine synthase OS=Homo sapiens GN=SRM PE=1 SV=1)

HSP 1 Score: 322.398 bits (825), Expect = 2.572e-110
Identity = 154/297 (51.85%), Postives = 203/297 (68.35%), Query Frame = 0 
Query:   17 DGENQKSLFKLDGKWFHETGKVFPGQAMSLEVEEVLFHQKSPYQDVLVFQSKTYGRVMVLDGMINSTSRDECAYQEMISFLPLNSHPNPKSVLVVGGGDGGVARDCAKHSKVERITMIEIDQMVVDASKEFLPEMAIGMSHPKVKLFVGDGLEYLENNEDTYDVIIADLSDPDDGGPAAKLFQETFYKLMKDRLNPGGIICAQGEVIWLDLEQCIKPMIDFCQKHFPSVTYACNNVPTYTCGIIGYVICSLEKDKDFRTPLHVFTEEEMDQMNLKYYNQDMHTGAFALPTFVKKKLN 313
            DG        +   WF ET  ++PGQA+SL+VE++L H++S YQD+LVF+SKTYG V+VLDG+I  T RDE +YQEMI+ LPL SHPNP+ VL++GGGDGGV R+  KH  VE +   EID+ V+  SK+FLP MAIG S  K+ L VGDG E+++ N+D +DVII D SDP   GPA  LF+E++Y+LMK  L   G++C QGE  WL L+  IK M  FCQ  FP V YA   +PTY  G IG+++CS     +F+ P+   T++++ QM LKYYN D+H  AF LP F +K LN
Sbjct:    6 DGPAASGPAAIREGWFRETCSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERDEFSYQEMIANLPLCSHPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIITDSSDP--MGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLHLD-LIKEMRQFCQSLFPVVAYAYCTIPTYPSGQIGFMLCSKNPSTNFQEPVQPLTQQQVAQMQLKYYNSDVHRAAFVLPEFARKALN 299
The following BLAST results are available for this feature:
BLAST of TCONS_00003487-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SPEE2.572e-11051.85Spermidine synthase OS=Homo sapiens GN=SRM PE=1 SV... [more]
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