TCONS_00004084-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00004084-protein
Unique Name	TCONS_00004084-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	402

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00004084-protein ID=TCONS_00004084-protein|Name=TCONS_00004084-protein|organism=Clytia hemisphaerica|type=polypeptide|length=402bp
MLNRVLRNQALRGSNFLRRISSTSSPKRALPSIDPGIEESPSLPVVNAHN
EWDPLEEVIVGRAENSVVPNFTTEVKANTYEYHWDFYKANNGEYFPAEHL
KKAVAEIEEFCRILEHEGVVVQRPDIIDHKKKYATPDFESTGLYAAMPRD
ILITIGNEIIEAPMAWRSRFFEYRAYRKLMKEYFRAGAKWTTAPKPFMSD
DLYDMDYPMKNVEERHQLASENRFVTTEFEPCFDAADFMRAGTDIFAQRS
QVTNLMGIEWMRRHLGDKYNVHLLSFKDPNPMHIDATFNIIGPGLVIVNP
ERPCEQRDMFEKAGWRLVEAAYPTISDAHPLWMSSKWLSMNVLMLDEKRV
VVDAHEIPTQKMFESLGIKCVKVDIRYANSLGGGFHCWTCDVRRRGELQS
YF

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_002280	XLOC_002280	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00004084	TCONS_00004084	Clytia hemisphaerica	transcript

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.75.10.10		coord: 44..402 e-value: 5.5E-75 score: 252.1
None	No IPR available	PFAM	PF02274	Amidinotransf	coord: 253..394 e-value: 9.8E-7 score: 28.1
None	No IPR available	SUPERFAMILY	55909	Pentein	coord: 45..402

Blast

[Close]

BLAST of TCONS_00004084-protein vs. Swiss-Prot (Human)
Match: GATM (Glycine amidinotransferase, mitochondrial OS=Homo sapiens GN=GATM PE=1 SV=1)

HSP 1 Score: 581.252 bits (1497), Expect = 0.000e+0
Identity = 276/401 (68.83%), Postives = 322/401 (80.30%), Query Frame = 0

Query:    2 LNRVLRNQALRGSNFLRRISSTSSPKRALPSIDPGIEESPSLPVVNAHNEWDPLEEVIVGRAENSVVPNFTTEVKANTYEYHWDFYKANNGEYFPAEHLKKAVAEIEEFCRILEHEGVVVQRPDIIDHKKKYATPDFESTGLYAAMPRDILITIGNEIIEAPMAWRSRFFEYRAYRKLMKEYFRAGAKWTTAPKPFMSDDLYDMDYPMKNVEERHQLASENRFVTTEFEPCFDAADFMRAGTDIFAQRSQVTNLMGIEWMRRHLGDKYNVHLLSFKDPNPMHIDATFNIIGPGLVIVNPERPCEQRDMFEKAGWRLVEAAYPTISDAHPLWMSSKWLSMNVLMLDEKRVVVDAHEIPTQKMFESLGIKCVKVDIRYANSLGGGFHCWTCDVRRRGELQSYF 402
            L R L     R   F    ++T+S + +  + D   E  P    V+++NEWDPLEEVIVGRAEN+ VP FT EVKANTYE +W FY+   G YFP +HLKKAVAEIEE C IL+ EGV V+RPD ID   KY TPDFESTGLY+AMPRDILI +GNEIIEAPMAWRSRFFEYRAYR ++K+YF  GAKWTTAPKP M+D+LY+ DYP+ +VE+RH+LA++ +FVTTEFEPCFDAADF+RAG DIFAQRSQVTN +GIEWMRRHL   Y VH++SFKDPNPMHIDATFNIIGPG+V+ NP+RPC Q D+F+KAGW ++    P I D HPLWMSSKWLSMNVLMLDEKRV+VDA+E+P QKMFE LGI  +KV+IR ANSLGGGFHCWTCDVRRRG LQSY 
Sbjct:   24 LGRTLTGWVQR--TFQSTQAATASSRNSCAADDKATEPLPKDCPVSSYNEWDPLEEVIVGRAENACVPPFTIEVKANTYEKYWPFYQKQGGHYFPKDHLKKAVAEIEEMCNILKTEGVTVRRPDPIDWSLKYKTPDFESTGLYSAMPRDILIVVGNEIIEAPMAWRSRFFEYRAYRSIIKDYFHRGAKWTTAPKPTMADELYNQDYPIHSVEDRHKLAAQGKFVTTEFEPCFDAADFIRAGRDIFAQRSQVTNYLGIEWMRRHLAPDYRVHIISFKDPNPMHIDATFNIIGPGIVLSNPDRPCHQIDLFKKAGWTIITPPTPIIPDDHPLWMSSKWLSMNVLMLDEKRVMVDANEVPIQKMFEKLGITTIKVNIRNANSLGGGFHCWTCDVRRRGTLQSYL 422

The following BLAST results are available for this feature:

BLAST of TCONS_00004084-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00004084-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
GATM	0.000e+0	68.83	Glycine amidinotransferase, mitochondrial OS=Homo ...	[more]

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TCONS_00004084-protein (polypeptide) - C. hemisphaerica