TCONS_00004393-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004393-protein
Unique NameTCONS_00004393-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length421

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004393-protein ID=TCONS_00004393-protein|Name=TCONS_00004393-protein|organism=Clytia hemisphaerica|type=polypeptide|length=421bp
CIPGCVNLKQGIKNTLNTPNNNHHEGQVYFRRLWKQLFLMKVLMENNGSG
DENNGSKRKRFTMIQRSSPTIRREESMEEYSPGEYNHDTSPPQQIAYESM
SSKETMHAQPPIKKSRGRPTKQYWTHEWSDHATEALIELWGEKEELYNKQ
HPLFYVKENKDKAVEEIRDSLRERGFDVTCNNILSKFQSLRTYFCTQRTK
HMATRRANGMSYLPDDGSECKWRFYKSLMFLDDNMKPRESHRKMELINAE
YSAPSFTSSNDLMTMRSHSYPNHHHQQPPVEYINPHDQSLEMNGYHGGST
SSSSSTNHVNKSHDLSFEENQGPPSGGRDYTVTSSYQEAAASSTSDKRLS
SSTSGSYGNTHNKHEDYIFGELVGNMVHQLPAGKHKDLVKLEIQQLIIKA
KYASKNNEEDETEIKSELNDA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002456XLOC_002456Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004393TCONS_00004393Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006578MADF-dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006578MADF domainSMARTSM00595118neu2coord: 135..236
e-value: 8.2E-4
score: 28.7
IPR006578MADF domainPFAMPF10545MADF_DNA_bdgcoord: 136..231
e-value: 1.3E-12
score: 47.8
IPR006578MADF domainPROSITEPS51029MADFcoord: 135..236
score: 10.088
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 258..361
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 101..120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..91

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00004393-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top