TCONS_00004414-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004414-protein
Unique NameTCONS_00004414-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length282

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004414-protein ID=TCONS_00004414-protein|Name=TCONS_00004414-protein|organism=Clytia hemisphaerica|type=polypeptide|length=282bp
MAANRSIRNIFYAPNMRHLAKQFCIHQRSMATMTSSNQISKSSKVGIWNN
DPSFPMPGNIGVDLNALDASSEIKASTSSPPPYQSLASAFLDLEDEAMRK
NRILNQFVSESLEDGEEVDLSEDKATTSYLDHNVECKIQSCPDHLMKSFT
SLFDSFPANEQLTVITLSQKTENDMTTWSEEVENEREELTGIFIDNAKEI
CSKIKENGHWADFIEPASGHAYYSSHRNETLFETDDRLNQLGFEIEDLGC
CKVLLHNEWKSNVFVGIIFTNAPADSHFFGSL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002469XLOC_002469Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004414TCONS_00004414Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019362MMADHC
Vocabulary: Biological Process
TermDefinition
GO:0009235cobalamin metabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009235 cobalamin metabolic process
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 168..188
IPR019362Methylmalonic aciduria and homocystinuria type D proteinPFAMPF10229MMADHCcoord: 27..279
e-value: 8.9E-71
score: 238.7

Blast
[Close]
BLAST of TCONS_00004414-protein vs. Swiss-Prot (Human)
Match: MMAD (Methylmalonic aciduria and homocystinuria type D protein, mitochondrial OS=Homo sapiens GN=MMADHC PE=1 SV=2)

HSP 1 Score: 194.897 bits (494), Expect = 6.174e-61
Identity = 103/235 (43.83%), Postives = 142/235 (60.43%), Query Frame = 0 
Query:   51 DPSFPMPGNIGVDLNALDASSEIKASTSSPPPYQSLASAFLDLEDEAMRKNR---ILNQFVSESLEDGEEVDLSEDKATTSYLDHNVECKIQSCPDHLMKSFTSLFDSFPANEQLTVITLSQKTENDMTTWSEEVENEREELTGIFIDNAKEICSKIKENGHWADFIEPASGHAYYSSHRNETLFETDDRLNQLGFEIEDLGCCKVLLHNEWKSNVFVGIIFTNAPADSHFFGSL 282
            D  F +PGNIG D +    +S+ K+      P         D+  E +   R   ++ Q+V+E   +   V+   + A T +    VEC IQ+CP+ L K F SLF    AN +L ++T++QKT+NDMT WSEEVE ERE L   FI+ AKEIC  ++  G+WADFI+P+SG A++  + N TLFETD+R   LGF ++DLGCCKV+ H+ W ++V VG IFTNA  DSH    L
Sbjct:   69 DQRFQLPGNIGFDCHLNGTASQKKSLVHKTLP---------DVLAEPLSSERHEFVMAQYVNEFQGNDAPVEQEINSAETYFESARVECAIQTCPELLRKDFESLFPEV-ANGKLMILTVTQKTKNDMTVWSEEVEIEREVLLEKFINGAKEICYALRAEGYWADFIDPSSGLAFFGPYTNNTLFETDERYRHLGFSVDDLGCCKVIRHSLWGTHVVVGSIFTNATPDSHIMKKL 293
The following BLAST results are available for this feature:
BLAST of TCONS_00004414-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MMAD6.174e-6143.83Methylmalonic aciduria and homocystinuria type D p... [more]
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