TCONS_00004522-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00004522-protein
Unique Name	TCONS_00004522-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	501

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00004522-protein ID=TCONS_00004522-protein|Name=TCONS_00004522-protein|organism=Clytia hemisphaerica|type=polypeptide|length=501bp
MVKQITREDGEDRTSPFNDQQTTEDETTRDVLSESDDYPDGNYDEKPLIP
PSLRGSESILSSPAKQASSSSPRDSDLLSNWQAAMHILKGNIGTGILGLP
IAVKHAGVIIGPAVLAVIAVISVHCMHLVVSASHALCLRNRADHYDYGEV
AEQVFLIYGGPKWASRARFVLDSFLVLTQLGFCCVYFLFVAENLKQLFGL
FDVRIWILVLLIPVLSLAYIQKLKFIAYISTAANLLSFFGLMGTYQYLFF
HLENPASFPASAPLKEFPLFFGTALFAFEGIGIVLPIENKMRKREDFFWV
LDLSMAFVASLFISMGFFGYITFGDQLLPSVTLNLPKLPFYVLVKLGYTL
AIFFTYFIQFYVPMEILIPPLKKGLAKGCTTGIDIFMRTAMVVVTCALAI
TIPQLDNFISLIGSTAAAALALVFPPMLYTMCFWKQDITKMEIVKNVTIS
SLGTIGAIFGTWLSVEAIIIGFEQHKNKHVVKEGLVGEFYHVYMNKSLPW
L

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_002543	XLOC_002543	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00004522	TCONS_00004522	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013057	AA_transpt_TM

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013057	Amino acid transporter, transmembrane domain	PFAM	PF01490	Aa_trans	coord: 79..464 e-value: 2.5E-66 score: 224.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..74

Blast

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BLAST of TCONS_00004522-protein vs. Swiss-Prot (Human)
Match: S36A1 (Proton-coupled amino acid transporter 1 OS=Homo sapiens GN=SLC36A1 PE=1 SV=1)

HSP 1 Score: 323.168 bits (827), Expect = 1.678e-105
Identity = 186/461 (40.35%), Postives = 276/461 (59.87%), Query Frame = 0

Query:   34 ESDDYPD-GNYDEKPLIPPSLRGSESILSSPAKQASSSSPRDSDLLSNWQAAMHILKGNIGTGILGLPIAVKHAGVIIGPAVLAVIAVISVHCMHLVVSASHALCLRNRADHYDYGEVAEQVFLIYGGP-KW----ASRARFVLDSFLVLTQLGFCCVYFLFVAENLKQ-------------------LFGLFDVRIWILVLLIPVLSLAYIQKLKFIAYISTAANLLSFFGLMGTYQYLFFHLENPASFPASAPLKEFPLFFGTALFAFEGIGIVLPIENKMRKREDFFWVLDLSMAFVASLFISMGFFGYITFGDQLLPSVTLNLPKLPFYVLVKLGYTLAIFFTYFIQFYVPMEILIPPLKKGLAKGCTTGIDIFMRTAMVVVTCALAITIPQLDNFISLIGSTAAAALALVFPPMLYTMCFWKQDITKMEIVKNVTISSLGTIGAIFGTWLSVEAII 469
             ++DY D  + D  P   PS  G  + LSSP    S      S+  + +Q  +H+LKGNIGTG+LGLP+AVK+AG+++GP  L +I +++VHCM ++V  +H  C R      DYG+    ++ +   P  W    A   R V+D FL++TQLGFCCVYF+F+A+N KQ                   L    D R+++L  L  ++ L +I+ L+ ++  S  AN+     L+  YQ++   + +P+  P  AP K +PLFFGTA+F+FEGIG+VLP+ENKM+    F  +L L M  V  L+IS+G  GY+ FG  +  S+TLNLP    Y  VKL Y++ IFFTY +QFYVP EI+IP       + C   +D+F+RT +V +TC LAI IP+LD  ISL+GS +++ALAL+ PP+L    F+ + ++ + I K+  IS LG +G + GT+ ++  +I
Sbjct:    7 RNEDYHDYSSTDVSPEESPS-EGLNN-LSSPG---SYQRFGQSNSTTWFQTLIHLLKGNIGTGLLGLPLAVKNAGIVMGPISLLIIGIVAVHCMGILVKCAHHFCRRLNKSFVDYGDTV--MYGLESSPCSWLRNHAHWGRRVVDFFLIVTQLGFCCVYFVFLADNFKQVIEAANGTTNNCHNNETVILTPTMDSRLYMLSFLPFLVLLVFIRNLRALSIFSLLANITMLVSLVMIYQFIVQRIPDPSHLPLVAPWKTYPLFFGTAIFSFEGIGMVLPLENKMKDPRKFPLILYLGMVIVTILYISLGCLGYLQFGANIQGSITLNLPNCWLYQSVKLLYSIGIFFTYALQFYVPAEIIIPFFVSRAPEHCELVVDLFVRTVLVCLTCILAILIPRLDLVISLVGSVSSSALALIIPPLLEVTTFYSEGMSPLTIFKDALISILGFVGFVVGTYEALYELI 460

The following BLAST results are available for this feature:

BLAST of TCONS_00004522-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00004522-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
S36A1	1.678e-105	40.35	Proton-coupled amino acid transporter 1 OS=Homo sa...	[more]

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TCONS_00004522-protein (polypeptide) - C. hemisphaerica