TCONS_00046703-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00046703-protein
Unique NameTCONS_00046703-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length723

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00046703-protein ID=TCONS_00046703-protein|Name=TCONS_00046703-protein|organism=Clytia hemisphaerica|type=polypeptide|length=723bp
MLKGSSGVRMLIQRVRNILQRKLPSKQLTFCMLRTLSSLATNEKQYPIEM
NPLPAYIEERLKIFDEIKAEHDASMEAKEKTSIKITLPDGKQVDGFSWKT
TPYEVAQGISQGLADNSVVAKVNGVLWDLDRPVEEDCTIELVKFDQPEGQ
QVFWHSSAHILGEAMERHYGGCLCYGPPIEEGFYYDMSIDDRQVSSNDFS
ALESVVKKIIKEKQQFVRLEMKKEDLLKMFAYNPFKLRILNERVTTPTTT
VYRCGPLIDLCRGPHVRHTGKTKAIAVTKNSATYWEGKAEAESLQRIYGI
SFPNDKMLKEWKHFQEEAAKRDHRKIGREQELFFFHELSPGSCFFLPNGA
HIYNTLVKFIRDEYKKRGFQEVISPNIYSTKLWETSGHWQHYSTNMFSFE
VEKERYALKPMNCPGHCVMFDHRPRSWRELPLRMADFGVLHRNELSGTLT
GLTRVRRFQQDDAHIFCRPDQIEEEIKSCLAFLRHVYDIFGFSFKLNLST
RPEKYMGDINMWNTAEKQLENSLNEFGEAWELNPGDGAFYGPKIDIQIKD
ALRRYHQCATIQLDFQLPERFNLNYVTGEGDERKRPVIIHRAILGSVERM
MAILTENYGGKWPFWLSPRQAIVVPVSPKYDEYAKKVADDLKASDFKAEA
NLDAGETLNKKIRNAQLAHYNFILVVGDKEQSSNTVNVRTRDNKVHGEKT
VEALFARFNDLMKTKKDDSEAEF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029798XLOC_029798Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00046703TCONS_00046703Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002320Thr-tRNA-ligase_IIa
IPR012947tRNA_SAD
IPR002314aa-tRNA-synt_IIb
IPR004095TGS
IPR004154Anticodon-bd
IPR012675Beta-grasp_dom
IPR006195aa-tRNA-synth_II
IPR033728ThrRS_core
IPR012676TGS-like
IPR018163Thr/Ala-tRNA-synth_IIc_edit
Vocabulary: Biological Process
TermDefinition
GO:0006435threonyl-tRNA aminoacylation
GO:0043039tRNA aminoacylation
GO:0006418tRNA aminoacylation for protein translation
Vocabulary: Molecular Function
TermDefinition
GO:0004829threonine-tRNA ligase activity
GO:0005524ATP binding
GO:0016876ligase activity, forming aminoacyl-tRNA and related compounds
GO:0004812aminoacyl-tRNA ligase activity
GO:0000166nucleotide binding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006435 threonyl-tRNA aminoacylation
biological_process GO:0043039 tRNA aminoacylation
biological_process GO:0006418 tRNA aminoacylation for protein translation
cellular_component GO:0005737 cytoplasm
molecular_function GO:0004812 aminoacyl-tRNA ligase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0016876 ligase activity, forming aminoacyl-tRNA and related compounds
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0004829 threonine-tRNA ligase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002320Threonine-tRNA ligase, class IIaPRINTSPR01047TRNASYNTHTHRcoord: 613..625
score: 56.87
coord: 586..599
score: 71.43
coord: 441..464
score: 67.86
coord: 542..570
score: 60.59
coord: 408..436
score: 55.54
IPR002320Threonine-tRNA ligase, class IIaTIGRFAMTIGR00418TIGR00418coord: 154..705
e-value: 4.5E-205
score: 680.8
IPR002320Threonine-tRNA ligase, class IIaHAMAPMF_00184Thr_tRNA_synthcoord: 148..710
score: 29.333
IPR012947Threonyl/alanyl tRNA synthetase, SADSMARTSM00863tRNA_SAD_4coord: 249..298
e-value: 5.4E-16
score: 69.1
IPR012947Threonyl/alanyl tRNA synthetase, SADPFAMPF07973tRNA_SADcoord: 250..298
e-value: 4.5E-11
score: 42.6
IPR002314Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)PFAMPF00587tRNA-synt_2bcoord: 400..608
e-value: 1.6E-37
score: 129.1
IPR004095TGSPFAMPF02824TGScoord: 83..143
e-value: 1.9E-16
score: 59.8
IPR004154Anticodon-bindingGENE3D3.40.50.800coord: 611..723
e-value: 4.5E-32
score: 110.0
IPR004154Anticodon-bindingPFAMPF03129HGTP_anticodoncoord: 620..708
e-value: 4.7E-19
score: 68.3
IPR004154Anticodon-bindingSUPERFAMILY52954Class II aaRS ABD-relatedcoord: 606..713
NoneNo IPR availableGENE3D3.30.930.10coord: 302..610
e-value: 1.3E-142
score: 474.1
NoneNo IPR availableGENE3D3.30.54.20coord: 225..253
e-value: 1.5E-15
score: 56.8
NoneNo IPR availableGENE3D3.30.980.10coord: 150..224
e-value: 1.6E-13
score: 50.5
NoneNo IPR availableGENE3D3.30.980.10coord: 254..301
e-value: 1.3E-8
score: 34.8
NoneNo IPR availableCDDcd00860ThrRS_anticodoncoord: 618..708
e-value: 2.07503E-31
score: 117.22
NoneNo IPR availableCDDcd01667TGS_ThrRS_Ncoord: 83..144
e-value: 1.91259E-26
score: 102.58
NoneNo IPR availableSUPERFAMILY55681Class II aaRS and biotin synthetasescoord: 322..604
IPR012675Beta-grasp domainGENE3D3.10.20.30coord: 82..146
e-value: 9.8E-27
score: 92.6
IPR006195Aminoacyl-tRNA synthetase, class IIPROSITEPS50862AA_TRNA_LIGASE_IIcoord: 347..613
score: 25.253
IPR033728Threonine-tRNA ligase catalytic core domainCDDcd00771ThrRS_corecoord: 321..618
e-value: 0.0
score: 534.437
IPR012676TGS-likeSUPERFAMILY81271TGS-likecoord: 83..143
IPR018163Threonyl/alanyl tRNA synthetase, class II-like, putative editing domainSUPERFAMILY55186ThrRS/AlaRS common domaincoord: 146..320

Blast
[Close]
BLAST of TCONS_00046703-protein vs. Swiss-Prot (Human)
Match: SYTC (Threonine--tRNA ligase, cytoplasmic OS=Homo sapiens GN=TARS PE=1 SV=3)

HSP 1 Score: 1090.49 bits (2819), Expect = 0.000e+0
Identity = 506/678 (74.63%), Postives = 583/678 (85.99%), Query Frame = 0 
Query:   49 EMNPLPAYIEERLKIFDEIKAEHDASM-EAKEKTS--IKITLPDGKQVDGFSWKTTPYEVAQGISQGLADNSVVAKVNGVLWDLDRPVEEDCTIELVKFDQPEGQQVFWHSSAHILGEAMERHYGGCLCYGPPIEEGFYYDMSIDDRQVSSNDFSALESVVKKIIKEKQQFVRLEMKKEDLLKMFAYNPFKLRILNERVTTPTTTVYRCGPLIDLCRGPHVRHTGKTKAIAVTKNSATYWEGKAEAESLQRIYGISFPNDKMLKEWKHFQEEAAKRDHRKIGREQELFFFHELSPGSCFFLPNGAHIYNTLVKFIRDEYKKRGFQEVISPNIYSTKLWETSGHWQHYSTNMFSFEVEKERYALKPMNCPGHCVMFDHRPRSWRELPLRMADFGVLHRNELSGTLTGLTRVRRFQQDDAHIFCRPDQIEEEIKSCLAFLRHVYDIFGFSFKLNLSTRPEKYMGDINMWNTAEKQLENSLNEFGEAWELNPGDGAFYGPKIDIQIKDALRRYHQCATIQLDFQLPERFNLNYVTGEGDERKRPVIIHRAILGSVERMMAILTENYGGKWPFWLSPRQAIVVPVSPKYDEYAKKVADDLKASDFKAEANLDAGETLNKKIRNAQLAHYNFILVVGDKEQSSNTVNVRTRDNKVHGEKTVEALFARFNDLMKTKKDDSEAEF 723
            E+NP P YI  RL++++ +KAEHD+ + E  EK S  IK+TLPDGKQVD  SWKTTPY++A GISQGLADN+V+AKVN V+WDLDRP+EEDCT+EL+KF+  E Q V+WHSSAHI+GEAMER YGGCLCYGPPIE GFYYDM +++  VSSNDFS+LE++ KKIIKEKQ F RLE+KKE LL MF YN FK RILNE+V TPTTTVYRCGPLIDLCRGPHVRHTGK KA+ + KNS+TYWEGKA+ E+LQRIYGISFP+ KMLKEW+ FQEEA  RDHRKIGR+QEL+FFHELSPGSCFFLP GA+IYN L++FIR EY+KRGFQEV++PNI++++LW TSGHWQHYS NMFSFEVEKE +ALKPMNCPGHC+MFDHRPRSWRELPLR+ADFGVLHRNELSG LTGLTRVRRFQQDDAHIFC  +QIE+EIK CL FLR VY +FGFSFKLNLSTRPEK++GDI +W+ AEKQLENSLNEFGE WELN GDGAFYGPKIDIQIKDA+ RYHQCATIQLDFQLP RFNL YV+ +GD++KRPVI+HRAILGSVERM+AILTENYGGKWPFWLSPRQ +VVPV P  DEYA+KV      + F A+ +LD G TLNKKIRNAQLA YNFILVVG+KE+ S TVN+RTRDNKVHGE+T+     R   L + +   +E EF
Sbjct:   46 ELNPWPEYIYTRLEMYNILKAEHDSILAEKAEKDSKPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNNVVWDLDRPLEEDCTLELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGCLCYGPPIENGFYYDMYLEEGGVSSNDFSSLEALCKKIIKEKQAFERLEVKKETLLAMFKYNKFKCRILNEKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIKALKIHKNSSTYWEGKADMETLQRIYGISFPDPKMLKEWEKFQEEAKNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEVEKELFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGDIEVWDQAEKQLENSLNEFGEKWELNSGDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRTRDNKVHGERTISETIERLQQLKEFRSKQAEEEF 723
The following BLAST results are available for this feature:
BLAST of TCONS_00046703-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SYTC0.000e+074.63Threonine--tRNA ligase, cytoplasmic OS=Homo sapien... [more]
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