TCONS_00048175-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00048175-protein
Unique NameTCONS_00048175-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length156

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00048175-protein ID=TCONS_00048175-protein|Name=TCONS_00048175-protein|organism=Clytia hemisphaerica|type=polypeptide|length=156bp
MPGRIEGKCLVCDETDAKYRCPKCKIVYCSLVCFKPHKESCANTVQQPMT
KLDDRNTKPSNEATINTPFVGDGGERMSNNLTSPESSVPQHLLLTEENDR
VPEELLRKLGDSNHLKGLLNNKHLRDMLHEINTSQNQSKTMEQVMQIPIF
TEFVDE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030660XLOC_030660Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00048175TCONS_00048175Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007529Znf_HIT
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007529Zinc finger, HIT-typePFAMPF04438zf-HITcoord: 7..35
e-value: 9.7E-10
score: 38.0
IPR007529Zinc finger, HIT-typePROSITEPS51083ZF_HITcoord: 9..41
score: 10.672
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..75
NoneNo IPR availableSUPERFAMILY144232HIT/MYND zinc finger-likecoord: 7..42

Blast
[Close]
BLAST of TCONS_00048175-protein vs. Swiss-Prot (Human)
Match: ZNHI3 (Zinc finger HIT domain-containing protein 3 OS=Homo sapiens GN=ZNHIT3 PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 4.917e-22
Identity = 53/147 (36.05%), Postives = 81/147 (55.10%), Query Frame = 0 
Query:    9 CLVCDETDAKYRCPKCKIVYCSLVCFKPHKESCANTVQQPMTKLDDRNTKPSNEATINTPFVGDGGERMSNNLTSPESSVPQHLLLTEENDRVPEELLRKLGDSNHLKGLLNNKHLRDMLHEINTSQNQSKTMEQVMQIPIFTEFVD 155
            C++C E   KYRCP C++ YCS+VCF+ HKE C N   +P+ K   R+  P+   T+      D  + +++ L S            EE DRV  + L+ LG+S  L+ LL N HLR ++  ++  ++++K M   MQ P+F EF D
Sbjct:   11 CVICLEK-PKYRCPACRVPYCSVVCFRKHKEQC-NPETRPVEK-KIRSALPTK--TVKPVENKDDDDSIADFLNS-----------DEEEDRVSLQNLKNLGESATLRSLLLNPHLRQLMVNLDQGEDKAKLMRAYMQEPLFVEFAD 141
The following BLAST results are available for this feature:
BLAST of TCONS_00048175-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZNHI34.917e-2236.05Zinc finger HIT domain-containing protein 3 OS=Hom... [more]
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