TCONS_00048226-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00048226-protein
Unique NameTCONS_00048226-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length301

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00048226-protein ID=TCONS_00048226-protein|Name=TCONS_00048226-protein|organism=Clytia hemisphaerica|type=polypeptide|length=301bp
SIPVEKRVAVSIWRLSNGASYRTVSKTFGVGKTTIVEINQDFVIALLRHT
REFIHFPETELETAIAIEKFHESARCELPQVVGAIDGTHMEILKPDSESR
VDYFSRKRKYTIMSQGVVGANSIFLDFVTGFPGSIHDARALQFTDLFRKA
ENETILTTPKKVIDGMRIRPLILGDGAYPASTWLLKPYPHIAPLDAEQRN
FNRALSSSRCTVEIGFGLLKSRWRCLLKRLDYNLENIPGVVMVCVVLHNI
CQIRGDSYISTDDVLENAIRRERVARRERRQLHDDFDDGNALREHLKEYL
S
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030688XLOC_030688Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00048226TCONS_00048226Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027806HARBI1_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027806Harbinger transposase-derived nuclease domainPFAMPF13359DDE_Tnp_4coord: 85..249
e-value: 3.0E-34
score: 117.9

Blast
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BLAST of TCONS_00048226-protein vs. Swiss-Prot (Human)
Match: HARB1 (Putative nuclease HARBI1 OS=Homo sapiens GN=HARBI1 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.517e-22
Identity = 69/253 (27.27%), Postives = 116/253 (45.85%), Query Frame = 0 
Query:    1 SIPVEKRVAVSIWRLSNGASYRTVSKTFGVGKTTIVEINQDFVIALLRHTREFIHFPETELETAIAIEKFHESARCELPQVVGAIDGTHMEILKPDSESRVDYFSRKRKYTIMSQGVVGANSIFLDFVTGFPGSIHDARALQFTDLFRKAENETILTTPKKVIDGMRIRPLILGDGAYPASTWLLKPYPHIAPLDAEQRNFNRALSSSRCTVEIGFGLLKSRWRCL---LKRLDYNLENIPGVVMVCVVLHNI 250
            +I  E +V  ++   ++G+    +    G+ + ++     +   AL+    +FI FP  E       ++F+  A   +P V+G +D  H+ I  P++E  + Y +RK  +++    V       +   T +PGS+ D   LQ + L  + E             GM     +LGD ++   TWL+ P  HI    AE R +N A S++   +E  F  L SR+RCL      L Y+ E    +++ C VLHNI
Sbjct:   66 AISPETQVLAALGFYTSGSFQTRMGDAIGISQASMSRCVANVTEALVERASQFIRFPADEASIQALKDEFYGLAG--MPGVMGVVDCIHVAIKAPNAED-LSYVNRKGLHSLNCLMVCDIRGTLMTVETNWPGSLQDCAVLQQSSLSSQFEA------------GMHKDSWLLGDSSFFLRTWLMTPL-HIPETPAEYR-YNMAHSATHSVIEKTFRTLCSRFRCLDGSKGALQYSPEKSSHIILACCVLHNI 301
The following BLAST results are available for this feature:
BLAST of TCONS_00048226-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HARB14.517e-2227.27Putative nuclease HARBI1 OS=Homo sapiens GN=HARBI1... [more]
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