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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000098 ID=TCONS_00000098|Name=TCONS_00000098|organism=Clytia hemisphaerica|type=transcript|length=1598bp
gtttttttaagcctaaaaattgttcttcaccattttttgagttatTTCAT
AACAAGAATGGAAAGTCAAACgaaggaaaaaaatcataatgattaTCAAA
AAGACTTTTGGGATGCTGCCCAACAACTTCATATATCTAACTGCTCCAAG
GAAGATTATGAACGTTTTGTAGACAAATGTAAGACATTGACAGATCCGCA
GTTCTTGTCCGAAATCACCGAATATCTCTTGGGAAGACTTCGATACGTAT
ATGAGGAAGTTGATTCTACTAAGATGTTAACTTCATTAATGGAAAAGTTG
ATGAACTTATTAAACTCCAAATCTTACAGCAAAATTAAACCTGTGAAAGT
CGATTCTATGTATGCTAGTATTCTATTGCTTTTTGGTGTCGAACACTCAA
TGTTCAATTCAAAGATTCTAACCAAATTCATTCTGGCAAGTTTGATGTCA
AAATCAATATCAGATGGACGCGTTCTTGGAGCAATGACTTTGGAATTCAT
TCTATCAGGGTTTATCAAAAATGCTTGTTTTGATATAGAGGAATGGAAAT
CTAACGATATTTTTTGTACCTTACTGCGCCATTTTGGAAAGgctatttct
aaaaataaccGATCTCAAATACTTCCTTTTTATAGAATAatcattcattt
tttcatcaataACCAAGATTGGGTGTTGGTTAAGGACATCTTGCCAACAG
TGCTTGATATCTCAAATCACAAACAAAACTTTAGTGAATATATTGAACTA
TTTGAAGGCTTGGACTCAGTTGATGCAGAGCGTCTCAATGTTCTCGTTCA
ATGTGGTGTTCCATTTTTTGCGGAGGTTCTGCATCGTGAGTCCTTGAGCG
TTATTGGATCTACCAGAGATGCAGAATATGAAAGCATGCTGAAATAtgta
aaaatgattttcaaagaTGATTTTTATTCAGATACAGCTAAAAAACTGAT
AGAACTCGATGAAATGAAGACCAAAGATGATAACAAAATGTGCAACGCTG
ATGGGAAAAGTATTTTGCAAAGACTGATCATTGATTTAAAAACAGAATTT
TATCATCATGATTTTTATATTGATCTAGTTCGTGTTCAAATACAAAACCT
AAAGCATCTACAAGTTAAAGGATGTCCAAAATTTTCATGGGAACAACCGG
ATGCTAGATTCAATCGAAACACAAACATTCAAGATTTTCTGCACAGTAAC
AAAGTAACGTTGAAATTAATTGGTAGAAATATCTTTGTTAACAATCTTGA
AATCGCACACTTTTGGATTAATGATTGGGCGCAACCACATATTGGACTTG
GTTTTAGTTTTACTGCGGTCGCAAGGTTATCAACGGAAGGCACAGTTGAA
ATTATACTgcaaaaagaacgacatatttatGAAAGGAAAAGAGATGGATA
TTTTAAGCTGATGAATGAATTGGTAGATTTGGAAACTTTCTTGCAGTCTC
AAAATATGATACATACTGGTACCAAACGAAAGTACAATATCGGAGAGGAA
AATAGAAACTGAATATTCTTACTTGAAAACTCGATTGATCATGGAGACCA
AAGCTTTGGCATTCAATGGTTCGTTGTGTGTCAATTTTGTGCACTCTT Run BLAST on NCBI transcript from alignment at sc0000001:1851360..1852957+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000098 ID=TCONS_00000098|Name=TCONS_00000098|organism=Clytia hemisphaerica|type=transcript|length=1598bp|location=Sequence derived from alignment at sc0000001:1851360..1852957+ (Clytia hemisphaerica)
gtttttttaagcctaaaaattgttcttcaccattttttgagttatTTCAT
AACAAGAATGGAAAGTCAAACgaaggaaaaaaatcataatgattaTCAAA
AAGACTTTTGGGATGCTGCCCAACAACTTCATATATCTAACTGCTCCAAG
GAAGATTATGAACGTTTTGTAGACAAATGTAAGACATTGACAGATCCGCA
GTTCTTGTCCGAAATCACCGAATATCTCTTGGGAAGACTTCGATACGTAT
ATGAGGAAGTTGATTCTACTAAGATGTTAACTTCATTAATGGAAAAGTTG
ATGAACTTATTAAACTCCAAATCTTACAGCAAAATTAAACCTGTGAAAGT
CGATTCTATGTATGCTAGTATTCTATTGCTTTTTGGTGTCGAACACTCAA
TGTTCAATTCAAAGATTCTAACCAAATTCATTCTGGCAAGTTTGATGTCA
AAATCAATATCAGATGGACGCGTTCTTGGAGCAATGACTTTGGAATTCAT
TCTATCAGGGTTTATCAAAAATGCTTGTTTTGATATAGAGGAATGGAAAT
CTAACGATATTTTTTGTACCTTACTGCGCCATTTTGGAAAGgctatttct
aaaaataaccGATCTCAAATACTTCCTTTTTATAGAATAatcattcattt
tttcatcaataACCAAGATTGGGTGTTGGTTAAGGACATCTTGCCAACAG
TGCTTGATATCTCAAATCACAAACAAAACTTTAGTGAATATATTGAACTA
TTTGAAGGCTTGGACTCAGTTGATGCAGAGCGTCTCAATGTTCTCGTTCA
ATGTGGTGTTCCATTTTTTGCGGAGGTTCTGCATCGTGAGTCCTTGAGCG
TTATTGGATCTACCAGAGATGCAGAATATGAAAGCATGCTGAAATAtgta
aaaatgattttcaaagaTGATTTTTATTCAGATACAGCTAAAAAACTGAT
AGAACTCGATGAAATGAAGACCAAAGATGATAACAAAATGTGCAACGCTG
ATGGGAAAAGTATTTTGCAAAGACTGATCATTGATTTAAAAACAGAATTT
TATCATCATGATTTTTATATTGATCTAGTTCGTGTTCAAATACAAAACCT
AAAGCATCTACAAGTTAAAGGATGTCCAAAATTTTCATGGGAACAACCGG
ATGCTAGATTCAATCGAAACACAAACATTCAAGATTTTCTGCACAGTAAC
AAAGTAACGTTGAAATTAATTGGTAGAAATATCTTTGTTAACAATCTTGA
AATCGCACACTTTTGGATTAATGATTGGGCGCAACCACATATTGGACTTG
GTTTTAGTTTTACTGCGGTCGCAAGGTTATCAACGGAAGGCACAGTTGAA
ATTATACTgcaaaaagaacgacatatttatGAAAGGAAAAGAGATGGATA
TTTTAAGCTGATGAATGAATTGGTAGATTTGGAAACTTTCTTGCAGTCTC
AAAATATGATACATACTGGTACCAAACGAAAGTACAATATCGGAGAGGAA
AATAGAAACTGAATATTCTTACTTGAAAACTCGATTGATCATGGAGACCA
AAGCTTTGGCATTCAATGGTTCGTTGTGTGTCAATTTTGTGCACTCTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000098-exon-sc0000001-1491911889:1851360..1852957 | TCONS_00000098-exon-sc0000001-1491911889:1851360..1852957 | Clytia hemisphaerica | exon |
| TCONS_00000098-exon-sc0000001-1510915933:1851360..1852957 | TCONS_00000098-exon-sc0000001-1510915933:1851360..1852957 | Clytia hemisphaerica | exon |
| TCONS_00000098-exon-sc0000001-1575043694:1851360..1852957 | TCONS_00000098-exon-sc0000001-1575043694:1851360..1852957 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001 | supercontig | sc0000001:1851360..1852957 + |
Blast
The following BLAST results are available for this feature:
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