TCONS_00049823-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049823-protein
Unique NameTCONS_00049823-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length493

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049823-protein ID=TCONS_00049823-protein|Name=TCONS_00049823-protein|organism=Clytia hemisphaerica|type=polypeptide|length=493bp
MSNINNEDERTQPTINTNDDFRKFGKKMVDLIADYHENVPNMPVLPDVKP
GYLAKLLPDEAPKEPEPWESICEDFKKAIVPGITPWNSPNFHAYFPTANS
YAAVMGGMLADTIGCVGFTWIASPACTELEMLTMDWLAKMFDLPDVFQHA
AEGHGGGVIQGSASESTLVAILAAKHRKLSQYGHDEDFGSKLIAYTSKQS
HSSVEKDVRLAGTKLRLLETDERFRLRGDELKRAIEEDKAKGLIPFFVCA
SAGTTNVCAFDALDEISAVSGEEGLWMHVDAAYAGAAMICPEYRYLMKGI
ENTDSLVVSCNKWLMVNFPCAAMFVRDSLDLINLFDINPLYLKHDYEQEI
PDFRHWQIPLGRRFRSLKLWMVLKSYGVKGLQENIRRQIQQAQLFEGMIR
DDVRFEVVNDVLMGLVCFRLIGDNTLNDKLNRRVNEARKIHMTPAYVNDQ
FVLRFVIASRLTENKDVKFAWDEIKNHADILSKNEHNKQRINE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031582XLOC_031582Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049823TCONS_00049823Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010977Aromatic_deC
IPR015421PyrdxlP-dep_Trfase_major_sub1
IPR002129PyrdxlP-dep_de-COase
IPR015422PyrdxlP-dep_Trfase_sub2
IPR021115Pyridoxal-P_BS
IPR015424PyrdxlP-dep_Trfase
Vocabulary: Biological Process
TermDefinition
GO:0006520cellular amino acid metabolic process
GO:0019752carboxylic acid metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016831carboxy-lyase activity
GO:0003824catalytic activity
GO:0030170pyridoxal phosphate binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019752 carboxylic acid metabolic process
biological_process GO:0006520 cellular amino acid metabolic process
molecular_function GO:0016831 carboxy-lyase activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0030170 pyridoxal phosphate binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010977Aromatic-L-amino-acid decarboxylasePRINTSPR00800YHDCRBOXLASEcoord: 44..61
score: 59.05
coord: 402..421
score: 54.0
coord: 62..81
score: 43.0
coord: 359..374
score: 71.43
coord: 109..127
score: 61.35
coord: 155..175
score: 64.76
coord: 88..107
score: 54.71
coord: 21..40
score: 48.57
coord: 128..147
score: 57.86
NoneNo IPR availableGENE3D1.20.1340.10coord: 17..96
e-value: 1.9E-33
score: 114.6
NoneNo IPR availableCDDcd06450DOPA_deC_likecoord: 91..477
e-value: 1.80227E-117
score: 351.12
IPR015421Pyridoxal phosphate-dependent transferase, major region, subdomain 1GENE3D3.40.640.10coord: 97..374
e-value: 1.5E-65
score: 220.5
IPR002129Pyridoxal phosphate-dependent decarboxylasePFAMPF00282Pyridoxal_deCcoord: 50..420
e-value: 3.7E-137
score: 456.9
IPR015422Pyridoxal phosphate-dependent transferase, subdomain 2GENE3D3.90.1150.10coord: 375..481
e-value: 8.2E-28
score: 96.6
IPR021115Pyridoxal-phosphate binding sitePROSITEPS00392DDC_GAD_HDC_YDCcoord: 305..326
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILY53383PLP-dependent transferasescoord: 19..479

Blast
[Close]
BLAST of TCONS_00049823-protein vs. Swiss-Prot (Human)
Match: DDC (Aromatic-L-amino-acid decarboxylase OS=Homo sapiens GN=DDC PE=1 SV=2)

HSP 1 Score: 514.227 bits (1323), Expect = 2.257e-180
Identity = 245/476 (51.47%), Postives = 332/476 (69.75%), Query Frame = 0 
Query:   19 DDFRKFGKKMVDLIADYHENVPNMPVLPDVKPGYLAKLLPDEAPKEPEPWESICEDFKKAIVPGITPWNSPNFHAYFPTANSYAAVMGGMLADTIGCVGFTWIASPACTELEMLTMDWLAKMFDLPDVFQHAAEGHGGGVIQGSASESTLVAILAAK----HR------KLSQYGHDEDFGSKLIAYTSKQSHSSVEKDVRLAGTKLRLLETDERFRLRGDELKRAIEEDKAKGLIPFFVCASAGTTNVCAFDALDEISAVSGEEGLWMHVDAAYAGAAMICPEYRYLMKGIENTDSLVVSCNKWLMVNFPCAAMFVRDSLDLINLFDINPLYLKHDYEQE--IPDFRHWQIPLGRRFRSLKLWMVLKSYGVKGLQENIRRQIQQAQLFEGMIRDDVRFEVVNDVLMGLVCFRLIGDNTLNDKLNRRVNEARKIHMTPAYVNDQFVLRFVIASRLTENKDVKFAWDEIKN-HADIL 481
             +FR+ GK+MVD +A+Y E +    V PDV+PGYL  L+P  AP+EP+ +E I  D +K I+PG+T W+SP F AYFPTA+SY A++  ML   IGC+GF+W ASPACTELE + MDWL KM +LP  F +   G GGGVIQGSASE+TLVA+LAA+    HR      +L+Q    E    KL+AY+S Q+HSSVE+   + G KL+ + +D  F +R   L+ A+E DKA GLIPFF+ A+ GTT  C+FD L E+  +  +E +W+HVDAAYAG+A ICPE+R+L+ G+E  DS   + +KWL+VNF C+AM+V+   DL   F ++P YLKH ++    I D+RHWQIPLGRRFRSLK+W V + YGVKGLQ  IR+ +Q +  FE ++R D RFE+  +V++GLVCFRL G N +N+ L +R+N A+KIH+ P ++ D+FVLRF I SR  E+  V+ AW+ IK   AD+L
Sbjct:    4 SEFRRRGKEMVDYMANYMEGIEGRQVYPDVEPGYLRPLIPAAAPQEPDTFEDIINDVEKIIMPGVTHWHSPYFFAYFPTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLELPKAFLNEKAGEGGGVIQGSASEATLVALLAARTKVIHRLQAASPELTQAAIME----KLVAYSSDQAHSSVERAGLIGGVKLKAIPSDGNFAMRASALQEALERDKAAGLIPFFMVATLGTTTCCSFDNLLEVGPICNKEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMWVKKRTDLTGAFRLDPTYLKHSHQDSGLITDYRHWQIPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFESLVRQDPRFEICVEVILGLVCFRLKGSNKVNEALLQRINSAKKIHLVPCHLRDKFVLRFAICSRTVESAHVQRAWEHIKELAADVL 475
The following BLAST results are available for this feature:
BLAST of TCONS_00049823-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DDC2.257e-18051.47Aromatic-L-amino-acid decarboxylase OS=Homo sapien... [more]
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