TCONS_00050460-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050460-protein
Unique NameTCONS_00050460-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length814

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050460-protein ID=TCONS_00050460-protein|Name=TCONS_00050460-protein|organism=Clytia hemisphaerica|type=polypeptide|length=814bp
MKVSILVCFTAIIWISLVRAQASDRRVCYYTNWAQYRNGIGKYFPSDYET
GLCTHIIYAFANVLEDTDGFYLHPYEWNDLQLGYPGVNSLKHNDPQLKTL
LAIGGWNFGSETFSKLVSDIDDMMVFAIRSADYLQLHEFDGLDLDWEYPG
HRGSPPEDKQRFTEFCQILKAEYSSRGLLLTAAVAAGPSTVQGAYEILPI
SKELDFINLMAYDLYGSWGPSTGHHTNMNSNSPLNVISSVEIWLASGMDP
DKLVLGLAPYGRTFTLSDKCNNGVGAPFIAPGTPGPYTGEAGFKAYYEIC
NSAWTSKVCTGNSEARAPHGVANGVWVGFDDEESVVYKVNNIVKDMGLGG
IMFWALDLDDFTGSCGGEKYPIIKAANRALLEENAPVFSSCQDFSDCGGI
KPTTTSTTTKSTVRPPVSTSTTTTSLPSGGCQMPPVSERKECWLNKDGPW
GKQPSIEQWCATSCKTDPSCNKQMCCCKGSTTPTTTTTTTTTIPTTTTTS
PLISPTTTTTTQSTTKSTTQSTTRSSTTKSTTQSTSTTKETPKPTLPPPT
SSTTTTQPLGGCQMPPVSDRKECWLNKEGPWGNNPAIGPWCATSCKTDPS
CNEQMCCCKGSTTPTTTTTTTTTTISPTTTSSTTKSSTKPTTQRTTTITQ
PTESSTTTTQQPPNTCFLPAYGKRKNCKSNPNGILAEFKEIDQFCRAGCE
TDPKCCEELCCCEEKDMTTDSTTTTTKPTTTTTQPTSTTTTTTMTKPTTT
TTKSTTTTTTEQPSGECEMPELLDRTECWLNEDGPFKSSVGMHKWCMNTC
VVDPSCTTLYCCCQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031955XLOC_031955Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050460TCONS_00050460Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011583Chitinase_II
IPR001223Glyco_hydro18_cat
IPR001579Glyco_hydro_18_chit_AS
IPR017853Glycoside_hydrolase_SF
IPR029070Chitinase_insertion
Vocabulary: Molecular Function
TermDefinition
GO:0008061chitin binding
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
molecular_function GO:0008061 chitin binding
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011583Chitinase IISMARTSM006362g34coord: 24..359
e-value: 9.3E-103
score: 357.4
NoneNo IPR availableGENE3D3.20.20.80coord: 16..396
e-value: 3.8E-91
score: 305.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 618..663
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 405..433
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 481..565
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 720..766
NoneNo IPR availableCDDcd02872GH18_chitolectin_chitotriosidasecoord: 26..380
e-value: 3.71045E-175
score: 510.564
IPR001223Glycoside hydrolase family 18, catalytic domainPFAMPF00704Glyco_hydro_18coord: 26..359
e-value: 4.5E-72
score: 243.3
IPR001579Glycoside hydrolase, chitinase active sitePROSITEPS01095CHITINASE_18coord: 139..147
IPR017853Glycoside hydrolase superfamilySUPERFAMILY51445(Trans)glycosidasescoord: 330..379
coord: 25..260
IPR029070Chitinase insertion domainSUPERFAMILY54556Chitinase insertion domaincoord: 260..329

Blast
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BLAST of TCONS_00050460-protein vs. Swiss-Prot (Human)
Match: CHIT1 (Chitotriosidase-1 OS=Homo sapiens GN=CHIT1 PE=1 SV=1)

HSP 1 Score: 321.242 bits (822), Expect = 3.014e-101
Identity = 167/389 (42.93%), Postives = 230/389 (59.13%), Query Frame = 0 
Query:    7 VCFTAIIWISLVRAQASDRRVCYYTNWAQYRNGIGKYFPSDYETGLCTHIIYAFANVLEDTDGFYLHPYEWNDLQLGYPGVNSLKHNDPQLKTLLAIGGWNFGSETFSKLVSDIDDMMVFAIRSADYLQLHEFDGLDLDWEYPGHRGSPPEDKQRFTEFCQILKAEYSSRG-------LLLTAAVAAGPSTVQGAYEILPISKELDFINLMAYDLYGSWGPSTGHHTNM-------NSNSPLNVISSVEIWLASGMDPDKLVLGLAPYGRTFTLSDKCNNGVGAPFIAPGTPGPYTGEAGFKAYYEICNSAWTSKVCTGNSEARAPHGVANGVWVGFDDEESVVYKVNNIVKDMGLGGIMFWALDLDDFTG-SCGGEKYPIIKAANRAL 380
            V +   + + ++   ++ + VCY+TNWAQYR G  ++ P D +  LCTH+IYAFA +        L   EWND  L Y   N LK  +P+LKTLLAIGGWNFG++ F+ +V+  ++   F   +  +L+ + FDGLDLDWEYPG +GSP  DK+RFT   Q L   +           LLL+AAV AG + V   YE+  I++ LDF+NLMAYD +GSW   TGH++ +        + + LNV ++V+ WL  G    KL+LG+  YGR+FTL+   +  VGAP    GTPGP+T E G  AYYE+C  +W         + + P+   +  WVGFDD ES   KV + +K  GLGG M WALDLDDF G SC   +YP+I+   + L
Sbjct:    5 VAWAGFMVLLMIPWGSAAKLVCYFTNWAQYRQGEARFLPKDLDPSLCTHLIYAFAGMTNHQ----LSTTEWNDETL-YQEFNGLKKMNPKLKTLLAIGGWNFGTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQGSPAVDKERFTTLVQDLANAFQQEAQTSGKERLLLSAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHGSWEKVTGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGTPASKLILGMPTYGRSFTLASSSDTRVGAPATGSGTPGPFTKEGGMLAYYEVC--SWKGATKQRIQDQKVPYIFRDNQWVGFDDVESFKTKV-SYLKQKGLGGAMVWALDLDDFAGFSCNQGRYPLIQTLRQEL 385
The following BLAST results are available for this feature:
BLAST of TCONS_00050460-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CHIT13.014e-10142.93Chitotriosidase-1 OS=Homo sapiens GN=CHIT1 PE=1 SV... [more]
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