TCONS_00051058-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00051058-protein
Unique Name	TCONS_00051058-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	568

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00051058-protein ID=TCONS_00051058-protein|Name=TCONS_00051058-protein|organism=Clytia hemisphaerica|type=polypeptide|length=568bp
MSQSDQSMSNNTDGSSMVFSNINTKDDMIHINNARKEHHNNTEDCTTLVN
SSNTLSIDEFLKNVGQLGRFQALTMLICALLLFVPSMQALVMVFTAHSPP
WSCDIFGQTQFSDTLNKTTTCNDTKAIFYEGQSGFNKRCGYERTNWVYRL
PKSHSIVSEFDLVCDHESLVYLSNSCLFFGQILGGFVVGWLSDRFGRKKP
LFTCSTLLCIVSFVSSYSANIYTLMFCRVVSGICVSGTVISVIVVAVELV
GSKYRAFAGLMVWNAWTTGICLMSLQSYYIANWRTLMKVITAPYIILNLG
FLFVPESIRWYHSKGRIDDALSVLRNVSKWNKRTFPEKKTLEPFYKNNKI
EEGTYLDLLTKKHCLKTLILFFTWFTGDCVYYGISLAFSDLSGHRHRDFV
LISLPEIFANLLAIYAVGRIGRKKTTIIGFAVTAIGLMTLGTLMYNDVHY
QSLDIVVGMIGKCFGIIAYCSNQILSVESYPTNIRSQAMGLFYVFSQLGG
ALAPWIAKGLLRYHVTLPLFVLGVFPIIASILALSLKETKGKDIDQQEAD
EGILENNEQSLNKNETHC

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_032362	XLOC_032362	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00051058	TCONS_00051058	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005828	MFS_sugar_transport-like
IPR005829	Sugar_transporter_CS
IPR020846	MFS_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0022857	transmembrane transporter activity
GO:0005215	transporter activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0022857	transmembrane transporter activity
molecular_function	GO:0005215	transporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1250.20		coord: 344..566 e-value: 4.4E-28 score: 97.5
None	No IPR available	GENE3D	1.20.1250.20		coord: 61..321 e-value: 1.7E-25 score: 89.0
IPR005828	Major facilitator, sugar transporter-like	PFAM	PF00083	Sugar_tr	coord: 136..549 e-value: 3.5E-38 score: 131.5
IPR005829	Sugar transporter, conserved site	PROSITE	PS00216	SUGAR_TRANSPORT_1	coord: 188..205
IPR020846	Major facilitator superfamily domain	PROSITE	PS50850	MFS	coord: 74..541 score: 22.033
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 168..537 e-value: 1.11373E-31 score: 123.578
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 168..548

Blast

[Close]

BLAST of TCONS_00051058-protein vs. Swiss-Prot (Human)
Match: S22AD (Solute carrier family 22 member 13 OS=Homo sapiens GN=SLC22A13 PE=2 SV=2)

HSP 1 Score: 176.022 bits (445), Expect = 2.886e-48
Identity = 140/545 (25.69%), Postives = 237/545 (43.49%), Query Frame = 0

Query:   59 EFLKNVGQLGRFQALTMLICALLLFVPSMQALVMVFTAHSPPWSC----------DIFGQTQFSDTLNKTTTCNDTKAIFYEGQSG-----------FNKRCGYERTNWVYRLPKSHSIVSEFDLVCDHESLVYLSNSCLFFGQILGGFVVGWLSDRFGRKKPLFTCSTLLCIVSFVSSYSANIYTLMFCRVVSGICVSGTVISVIVVAVELVGSKYRAFAGLMVWNAWTTGICLMSLQSYYIANWRTLMKVITAPYIILNLGFLFVPESIRWYHSKGRIDDALSVLRNVSKWNKRTFPEKKTLEPFYKNNKIEE-----GTYLDLLTKKHCLK-TLILFFTWFTGDCVYYGISLAFSDLSGHRHRDFVLISLPEIFANLLAIYAVGRIGRKKTTIIGFAVTAIGLMTLGTLMYNDVHYQSLDIVV-----GMIGKCFGIIAYCSNQILSVESYPTNIRSQAMGLFYVFSQLGGALAPWIAKGLLRYHVTLPLFVLGVFPIIASILALSLKETKGKDIDQ--QEADEGILENNEQSL-NKNETHC 568
            + L  +G  GRFQ   +++  +L F+        VF     P  C          ++    Q   ++   T  +    + +                FN+    +   W Y   +  S+ +EF+LVCD + L   + S    G ++G  + G L DR GRK  +     L  ++   +++  +    M  R      V+G   S + +  E VG  +R  A ++    ++ G  +++  +Y   NWR L    TAP ++L   F  +PES RW  ++GR+D+A+ +++  +  N+R       L P   N  + E     G  LDL       K TLI+F  WF     YYG+SL   D     +   ++    E+ A   +I+ + R GRK +         +G + LG LM   + +   D+ V      ++GK     A+  + + S E +PT +R   MGL  +FS++GG L P +   L  YH  LP+ + G  PI+A +L   L ET G+ +    Q+ + G    + +S+ ++ ET  
Sbjct:    6 QVLAEIGDFGRFQIQLLILLCVLNFLSPFYFFAHVFMVLDEPHHCAVAWVKNHTFNLSAAEQLVLSVPLDTAGHPEPCLMFRPPPANASLQDILSHRFNETQPCD-MGWEYPENRLPSLKNEFNLVCDRKHLKDTTQSVFMAGLLVGTLMFGPLCDRIGRKATILAQLLLFTLIGLATAFVPSFELYMALRFAVATAVAGLSFSNVTLLTEWVGPSWRTQAVVLAQCNFSLGQMVLAGLAYGFRNWRLLQITGTAPGLLLFFYFWALPESARWLLTRGRMDEAIQLIQKAASVNRR------KLSPELMNQLVPEKTGPSGNALDLFRHPQLRKVTLIIFCVWFVDSLGYYGLSLQVGDFGLDVYLTQLIFGAVEVPARCSSIFMMQRFGRKWSQ--------LGTLVLGGLMCIIIIFIPADLPVVVTMLAVVGKMATAAAFTISYVYSAELFPTILRQTGMGLVGIFSRIGGILTPLVIL-LGEYHAALPMLIYGSLPIVAGLLCTLLPETHGQGLKDTLQDLELGPHPRSPKSVPSEKETEA 534

The following BLAST results are available for this feature:

BLAST of TCONS_00051058-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00051058-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
S22AD	2.886e-48	25.69	Solute carrier family 22 member 13 OS=Homo sapiens...	[more]

You are here

TCONS_00051058-protein (polypeptide) - C. hemisphaerica