TCONS_00051196-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00051196-protein
Unique NameTCONS_00051196-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length537

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00051196-protein ID=TCONS_00051196-protein|Name=TCONS_00051196-protein|organism=Clytia hemisphaerica|type=polypeptide|length=537bp
MENTKITMKSKIEITVKEEEIEEEEEQKPQTDAIITSTYQMAISYTNTFP
YVPPTLKRRREYDDPISYSERYVDRIHQKRRESDSLLRDDGEYYGKELRH
KFKLEPVDNEFFRTENESSVKRIGKSRIHFPVVPYPKQDHCNCSECTYSY
RRDYYHTKTAHPPTTTTPHQRQSINMNSYDDIPTMKDQRRESFGNLSPNA
TIPSLPLRCDSIRAPNNTNKVIQHLEENDVQTPPFSPASTNISLGSPSTG
SPGKYSLTGDDREDLDGESTLSEESSILGLSLQDQKQGKGKYICKICDRD
FTWFGNFQKHVLQHGNIKENDYFFPVDNLAEEHMISKESNNNFRCKLCNK
TFTRVSSLKTHIRMHNGLRPFKCKECELAFTTNRALKMHSRIHSGERPYK
CGLCDKTFTRKDELQAHTYLHKGEKPYKCEVCSSAFVRQGHLQRHMLTHA
SEKPYKCKLCPKSFTQYRNLQTHIYKHTGERPYKCQYCGKGFTQHGTVQA
HERTHTGMKPYACDHCDKRFITSSHLRWHVKKHHANP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032447XLOC_032447Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00051196TCONS_00051196Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 7..27
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 399..421
e-value: 4.0E-5
score: 23.7
coord: 371..393
e-value: 0.0068
score: 16.7
coord: 483..505
e-value: 4.9E-4
score: 20.3
coord: 455..477
e-value: 1.5E-4
score: 21.9
coord: 427..449
e-value: 5.3E-5
score: 23.4
coord: 511..533
e-value: 5.8E-4
score: 20.1
NoneNo IPR availableGENE3D2.20.28.10coord: 138..297
e-value: 0.001
score: 18.3
NoneNo IPR availableGENE3D2.40.155.10coord: 342..370
e-value: 3.2E-14
score: 53.1
coord: 298..341
e-value: 2.9E-6
score: 27.0
NoneNo IPR availableGENE3D3.30.160.60coord: 456..467
e-value: 5.6E-7
score: 29.0
coord: 371..384
e-value: 2.2E-9
score: 36.7
NoneNo IPR availableGENE3D3.30.160.60coord: 517..536
e-value: 2.1E-7
score: 30.2
NoneNo IPR availableGENE3D2.20.25.10coord: 504..516
e-value: 2.7E-5
score: 23.6
NoneNo IPR availableGENE3D3.30.160.60coord: 385..411
e-value: 5.5E-18
score: 64.6
NoneNo IPR availableGENE3D2.20.28.10coord: 436..455
e-value: 3.7E-12
score: 45.4
NoneNo IPR availablePFAMPF12874zf-metcoord: 343..363
e-value: 6.5E-6
score: 26.3
NoneNo IPR availableGENE3D3.30.160.60coord: 491..503
e-value: 8.0E-8
score: 31.8
NoneNo IPR availableGENE3D3.30.160.60coord: 412..435
e-value: 1.1E-17
score: 63.6
coord: 468..490
e-value: 8.2E-18
score: 64.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 229..272
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 371..393
e-value: 0.0066
score: 25.7
coord: 292..314
e-value: 0.0031
score: 26.7
coord: 399..421
e-value: 0.001
score: 28.3
coord: 455..477
e-value: 3.5E-4
score: 29.9
coord: 427..449
e-value: 3.8E-4
score: 29.8
coord: 511..533
e-value: 0.0033
score: 26.7
coord: 483..505
e-value: 0.0017
score: 27.6
coord: 343..365
e-value: 1.0E-4
score: 31.7
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 345..365
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 457..477
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 294..314
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 485..505
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 373..393
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 401..421
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 429..449
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 513..534
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 483..510
score: 15.874
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 455..482
score: 15.23
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 511..537
score: 11.468
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 292..319
score: 9.494
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 343..370
score: 15.334
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 399..426
score: 15.189
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 427..454
score: 14.524
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 371..398
score: 15.355
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 287..313
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 379..436
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 343..393
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 477..529
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 435..492

Blast
BLAST of TCONS_00051196-protein vs. Swiss-Prot (Human)
Match: ZN233 (Zinc finger protein 233 OS=Homo sapiens GN=ZNF233 PE=2 SV=3)

HSP 1 Score: 206.453 bits (524), Expect = 9.436e-59
Identity = 100/245 (40.82%), Postives = 142/245 (57.96%), Query Frame = 0
Query:  294 CKICDRDFTWFGNFQKHVLQHGNIKENDYFFPVDNL-----AEEHMISKESNNNFRCKLCNKTFTRVSSLKTHIRMHNGLRPFKCKECELAFTTNRALKMHSRIHSGERPYKCGLCDKTFTRKDELQAHTYLHKGEKPYKCEVCSSAFVRQGHLQRHMLTHASEKPYKCKLCPKSFTQYRNLQTHIYKHTGERPYKCQYCGKGFTQHGTVQAHERTHTGMKPYACDHCDKRFITSSHLRWHVKKH 533
            C + D+ F+     Q H  Q G+ ++  Y + V +      +  H         ++C++C+K F++ S+L+ H R+H G +P+KC  C+  F+ N  L+ H R+H+GE+PYKC  C K F++   LQAH  +HKGEKPYKCE C   F +  HLQ H   H  E PYKC +C K F+   +LQ H   HTGE+PYKC+ C KGF  +  +  H+R HTG KPY C  C K F  +SHL+ H + H
Sbjct:  400 CDVYDKGFSQTSQLQAH--QRGHSRDKTYKWEVSDRIFNRNSGLHQRVHTGEKPYKCEVCDKGFSKASNLQAHQRIHTGEKPYKCDVCDKNFSRNSHLQAHQRVHTGEKPYKCDTCGKDFSQISHLQAHQRVHKGEKPYKCETCGKGFSQSSHLQDHQQVHTGENPYKCDVCGKGFSWSSHLQAHQRVHTGEKPYKCEECRKGFIWNSYLHVHQRIHTGEKPYKCGMCGKSFSQTSHLQAHQRVH 642          

HSP 2 Score: 189.119 bits (479), Expect = 1.623e-52
Identity = 96/233 (41.20%), Postives = 123/233 (52.79%), Query Frame = 0
Query:  288 GKGKYICKICDRDFTWFGNFQKHVLQHGNIKENDYFFPVDNLAEEHMISKESNNNFRCKLCNKTFTRVSSLKTHIRMHNGLRPFKCKECELAFTTNRALKMHSRIHSGERPYKCGLCDKTFTRKDELQAHTYLHKGEKPYKCEVCSSAFVRQGHLQRHMLTHASEKPYKCKLCPKSFTQYRNLQTHIYKHTGERPYKCQYCGKGFTQHGTVQAHERTHTGMKPYACDHCDKRF 520
            G+  Y C++CD+ F+   N Q H   H   K                        ++C +C+K F+R S L+ H R+H G +P+KC  C   F+    L+ H R+H GE+PYKC  C K F++   LQ H  +H GE PYKC+VC   F    HLQ H   H  EKPYKC+ C K F     L  H   HTGE+PYKC  CGK F+Q   +QAH+R HTG KPY C  C K F
Sbjct:  448 GEKPYKCEVCDKGFSKASNLQAHQRIHTGEKP-----------------------YKCDVCDKNFSRNSHLQAHQRVHTGEKPYKCDTCGKDFSQISHLQAHQRVHKGEKPYKCETCGKGFSQSSHLQDHQQVHTGENPYKCDVCGKGFSWSSHLQAHQRVHTGEKPYKCEECRKGFIWNSYLHVHQRIHTGEKPYKCGMCGKSFSQTSHLQAHQRVHTGEKPYKCFVCGKGF 657          

HSP 3 Score: 152.14 bits (383), Expect = 1.947e-39
Identity = 86/219 (39.27%), Postives = 116/219 (52.97%), Query Frame = 0
Query:  341 NNFRCKLCNKTFTRVSSLKTHIRMHNGLRPFKCKECELAFTTNRALKMHSRIHSGERPYKCGLCDKTFTRKDELQAH--------TY------------------LHKGEKPYKCEVCSSAFVRQGHLQRHMLTHASEKPYKCKLCPKSFTQYRNLQTHIYKHTGERPYKCQYCGKGFTQHGTVQAHERTHTGMKPYACDHCDKRFITSSHLRWHVKKH 533
            N +RC++  ++  + S L +H   H G +   C  C   F  +    +H    +GER  KC + DK F++  +LQAH        TY                  +H GEKPYKCEVC   F +  +LQ H   H  EKPYKC +C K+F++  +LQ H   HTGE+PYKC  CGK F+Q   +QAH+R H G KPY C+ C K F  SSHL+ H + H
Sbjct:  340 NLYRCQVYARSSNQNSCLPSHELTHPGEKLCTCGRCGKGFHHSLDFDIHCVDSAGERACKCDVYDKGFSQTSQLQAHQRGHSRDKTYKWEVSDRIFNRNSGLHQRVHTGEKPYKCEVCDKGFSKASNLQAHQRIHTGEKPYKCDVCDKNFSRNSHLQAHQRVHTGEKPYKCDTCGKDFSQISHLQAHQRVHKGEKPYKCETCGKGFSQSSHLQDHQQVH 558          

HSP 4 Score: 115.161 bits (287), Expect = 5.356e-27
Identity = 56/150 (37.33%), Postives = 79/150 (52.67%), Query Frame = 0
Query:  287 QGKGKYICKICDRDFTWFGNFQKHVLQHGNIKENDYFFPVDNLAEEHMISKESNNNFRCKLCNKTFTRVSSLKTHIRMHNGLRPFKCKECELAFTTNRALKMHSRIHSGERPYKCGLCDKTFTRKDELQAHTYLHKGEKPYKCEVCSSAF 436
            +G+  Y C+ C + F+   + Q H   H                          N ++C +C K F+  S L+ H R+H G +P+KC+EC   F  N  L +H RIH+GE+PYKCG+C K+F++   LQAH  +H GEKPYKC VC   F
Sbjct:  531 KGEKPYKCETCGKGFSQSSHLQDHQQVH-----------------------TGENPYKCDVCGKGFSWSSHLQAHQRVHTGEKPYKCEECRKGFIWNSYLHVHQRIHTGEKPYKCGMCGKSFSQTSHLQAHQRVHTGEKPYKCFVCGKGF 657          

HSP 5 Score: 88.1965 bits (217), Expect = 2.277e-18
Identity = 63/211 (29.86%), Postives = 90/211 (42.65%), Query Frame = 0
Query:  349 NKTFTRVSSLKTHIRMHNGLRPFKCKECELAFTTNRALKMHSRIHSGERPYKCGLCDKTFTRKDELQAHTYLHKGEKPYKCEVCSSAFVRQGHLQRHMLTHASEKPYKCKLCPKSFTQYRNLQTHIYKHTGERPYKCQYCGKGFTQHGTVQA--------------------------HERTHTGMKPYACDHCDKRFITSSHLRWHVKKH 533
             K  +  S+L+ H ++H   +P    E       +  L  H   H GE+ Y+ G   + F++   LQ H  +  GE  Y+C+V + +  +   L  H LTH  EK   C  C K F    +   H     GER  KC    KGF+Q   +QA                          H+R HTG KPY C+ CDK F  +S+L+ H + H
Sbjct:  264 GKGLSVGSNLELHQQLHLRDKPHVNVEYGKGIGYSSGLPRHQCFHIGEKCYRNGDSGEGFSQGSHLQPHQRVSTGENLYRCQVYARSSNQNSCLPSHELTHPGEKLCTCGRCGKGFHHSLDFDIHCVDSAGERACKCDVYDKGFSQTSQLQAHQRGHSRDKTYKWEVSDRIFNRNSGLHQRVHTGEKPYKCEVCDKGFSKASNLQAHQRIH 474          
The following BLAST results are available for this feature:
BLAST of TCONS_00051196-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN2339.436e-5940.82Zinc finger protein 233 OS=Homo sapiens GN=ZNF233 ... [more]
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