Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00051255-protein ID=TCONS_00051255-protein|Name=TCONS_00051255-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1342bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00051255-protein vs. Swiss-Prot (Human)
Match: VP13C (Vacuolar protein sorting-associated protein 13C OS=Homo sapiens GN=VPS13C PE=1 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.868e-34 Identity = 204/943 (21.63%), Postives = 410/943 (43.48%), Query Frame = 0 Query: 67 LSDTEKEELYKAIGYLEEKNHPTYSKSYVRAKLKLTLDTCYINILKSEREKISFNLK-KLIAIATE---RPGSDGLGLALQIEDVGAVQSVHREEI--NIVEPHARNDPNLLVCDFQINPVDVKAYYAAQIKSQPLDVYFHKKTVDILADVFTVEDDQKIMMEMQRAAT-ETVAELRNASRAGIEYTIMNNKALYLDFNMKSPTVIFPLKYADESNEEAVRIYFGDLVVKTELESELQEQLLNEVTESDLEILF---YHHTDITVSNIHMAVSRLEEGSRLRVNENTDEKNYIIPPIGFNLDVYRCLKQGYANFPDFRISGEIPSITINLTEDYIVYLYQLMTYITSQEVPIICNNIDL-QSTTSISKNKTTSTISELTAIQDLLMQSAKPLKERLQTHQNEETNHEVGYDTVDGGLPMGESNYDSAMSTFNRTKLDSTFTISQIEVVYMMEDRKE---FLFHINTIGCDVIMHMWDLNVNARVK--YFDFVAAVSSNDLIVQSITSED-----LISFSLTQADASGPEFNTTFNQTELSSSVDCSGFNFYLQDKSLTTLLKTIDKINRRLPTLEELDVPSKQPTKADLLANESMSLKKNVLGTIIEYHDDDEEDLDDLDVEAKKSMTELERKVM-----DKIDFLLNFKLKKVNVILEANNKQLCQIIVEDLHSDVKTRSKSTEIDASLIKIKMIDKDPGTLYPEIFHEESENVIKAKIVMYNEIAR--LDLQPDM---DVDITFCKMKIVCNLDFFCA----IYKMILDITSPMNSKIIPEQS-----------QIEKKKEVANTEFTKMSLKLSLDAPYIIYPLQCKYQDHLLIDLGHLNLTNELKMTEDD-----ILYDTMHVELTDVKIESALED----HCDF-ILAPFAMQSSISRSLNAELYSMDIGIILQEAKVRLVPIDVSFTVDLINALMKSL 953 ++ EK++L+ AIGY E ++ T K YV + L L + + I E + I LK ++I + T+ RPG+ L + ++E + + +++I ++V +LL F+ NP D A ++SQP++V + KTV+ + + F + ++ + +E +AT + E++ + G+ + I K L L N+K ++ P + + + FG + + ++Q L + T S LE + Y D+ + N+ + +R EE + + +I+ P+ ++++ + + + F++SG +P + + +++ + ++V + N+I L Q +++ S + S+I ++ L+ ++ L +E + E G + E + + L F I ++ + + + ++E +F++ +G + M +DL V + +K D+ S + I+S D L+ +AD +GP F T F +TE + V S N LQ ++L + + I +PS ++S+S+ K V + E ++ + L + ++ D IDF L KL VI+ + +I ++ L S + +S+ + A L I + D DP T++ KA +M NE+ R LDL PD D+ K+ V +L+ C ++K ++ + + +N+ ++S K++A F ++S+ + L AP I+ P + +++DLG + + N+ + D+ + D M V+LT + + + H D +L P ++ ++R+L A Y + + E K L ++VS + +N L + L Sbjct: 500 MTPEEKDKLFTAIGYSESTHNLTLPKQYVAHIMTLKLVSTSVTI--RENKNIPEILKIQIIGLGTQVSQRPGAQALKVEAKLEH-WYITGLRQQDIVPSLVASIGDTTSSLLKIKFETNPEDSPADQTLIVQSQPVEVIYDAKTVNAVVEFF--QSNKGLDLEQITSATLMKLEEIKERTATGLTHIIETRKVLDLRINLKPSYLVVPQTGFHHEKSDLLILDFGTFQLNS------KDQGLQKTTNSSLEEIMDKAYDKFDVEIKNVQLLFARAEETWK-KCRFQHPSTMHILQPMDIHVELAKAMVEKDIRMARFKVSGGLPLMHVRISDQKM------------KDVLYLMNSIPLPQKSSAQSPERQVSSIPIISGGTKGLLGTSLLLDTVESESDDEYFDAEDGEPQTCKSMKGSELKKAAEVPNEELINLLLKFEIKEVILEFTKQQKEEDTILVFNVTQLGTEATMRTFDLTVVSYLKKISLDYHEIEGSKRKPLHLISSSDKPGLDLLKVEYIKADKNGPSFQTAFGKTEQTVKVAFSSLNLLLQTQALVASINYLTTI-----------IPSD---------DQSISVAKEV----------------QISTEKQQKNSTLPKAIVSSRDSDIIDFRLFAKLNAFCVIVCNEKNNIAEIKIQGLDSSLSLQSRKQSLFARLENIIVTDVDPKTVHK-----------KAVSIMGNEVFRFNLDLYPDATEGDLYTDMSKVDGVLSLNVGCIQIVYLHKFLMSLLNFLNNFQTAKESLSAATAQAAERAATSVKDLAQRSF-RVSINIDLKAPVIVIPQSSISTNAVVVDLGLIRVHNQFSLVSDEDYLNPPVIDRMDVQLTKLTLYRTVIQPGIYHPDIQLLHPINLEFLVNRNLAASWYHK---VPVVEIKGHLDSMNVSLNQEDLNLLFRIL 1367 The following BLAST results are available for this feature:
BLAST of TCONS_00051255-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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