TCONS_00051955-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00051955-protein
Unique NameTCONS_00051955-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length184

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00051955-protein ID=TCONS_00051955-protein|Name=TCONS_00051955-protein|organism=Clytia hemisphaerica|type=polypeptide|length=184bp
MSSKSVNILERPLSKGKYEVNISSYALLFSEIVQYCQSRVFTVTELQDKL
AGFGEQIGLKLFDTLTIRERGHRRDTRLLNILMFIRSNLWKTLFGREADK
LEHANDDVATYYIIEKESLVNRFISVPKDKGQLNCAAFTAGILEGILRGC
GFPASVTVHWHKGTTFLIKFEDSVIEREKAFDGK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032886XLOC_032886Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00051955TCONS_00051955Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007194TRAPP_component
IPR016696TRAPP-I_su5
IPR024096NO_sig/Golgi_transp_ligand-bd
Vocabulary: Cellular Component
TermDefinition
GO:0030008TRAPP complex
Vocabulary: Biological Process
TermDefinition
GO:0048193Golgi vesicle transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048193 Golgi vesicle transport
cellular_component GO:0030008 TRAPP complex
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007194Transport protein particle (TRAPP) componentPFAMPF04051TRAPPcoord: 26..170
e-value: 2.1E-36
score: 124.7
NoneNo IPR availableGENE3D3.30.1380.20coord: 18..184
e-value: 6.9E-48
score: 161.7
IPR016696TRAPP I complex, subunit 5PIRSFPIRSF017479TRAPP_1_Trs31coord: 1..184
e-value: 2.5E-70
score: 234.2
IPR016696TRAPP I complex, subunit 5CDDcd14943TRAPPC5_Trs31coord: 20..171
e-value: 3.16322E-83
score: 244.751
IPR024096NO signalling/Golgi transport ligand-binding domainSUPERFAMILY111126Ligand-binding domain in the NO signalling and Golgi transportcoord: 19..182

Blast
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BLAST of TCONS_00051955-protein vs. Swiss-Prot (Human)
Match: TPPC5 (Trafficking protein particle complex subunit 5 OS=Homo sapiens GN=TRAPPC5 PE=1 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 9.769e-82
Identity = 102/177 (57.63%), Postives = 141/177 (79.66%), Query Frame = 0 
Query:    8 ILERPLSKGKYEVNISSYALLFSEIVQYCQSRVFTVTELQDKLAGFGEQIGLKLFDTLTIRERGHRRDTRLLNILMFIRSNLWKTLFGREADKLEHANDDVATYYIIEKESLVNRFISVPKDKGQLNCAAFTAGILEGILRGCGFPASVTVHWHKGTTFLIKFEDSVIEREKAFDGK 184
            +LER L++ + EV++S++ALLFSE+VQ+CQSRVF+V ELQ +LA  G Q+G ++ D L  RE+G RR+T++L  L+F++  +WK LFG+EADKLE ANDD  T+YIIE+E L+N +ISVPK+   LNCA+FTAGI+E +L   GFPA VT HWHKGTT +IKFE++VI R++A +G+
Sbjct:   12 LLERALARPRTEVSLSAFALLFSELVQHCQSRVFSVAELQSRLAALGRQVGARVLDALVAREKGARRETKVLGALLFVKGAVWKALFGKEADKLEQANDDARTFYIIEREPLINTYISVPKENSTLNCASFTAGIVEAVLTHSGFPAKVTAHWHKGTTLMIKFEEAVIARDRALEGR 188
The following BLAST results are available for this feature:
BLAST of TCONS_00051955-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TPPC59.769e-8257.63Trafficking protein particle complex subunit 5 OS=... [more]
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