TCONS_00052397-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00052397-protein
Unique Name	TCONS_00052397-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	630

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00052397-protein ID=TCONS_00052397-protein|Name=TCONS_00052397-protein|organism=Clytia hemisphaerica|type=polypeptide|length=630bp
MKEEQIMLNAKVHKLEEDLKFAHIMSDKYQQQLKEAHQELRSKLDKTTKL
MQEKVPFIDTENTMLNKLNIPVCDRNHQHTAQNFIESTCNQTIVLMAGLS
DYHTYLEQRLKVYSLDIMHEKASASNTKFSSYLLQNAIYSRKVQHTLTEL
LDEAKQEVFISLSTLPSYGSFVNDLKSYVKYLEKLLPYRVLSVNEECQSS
MWSENLEKTNNNLLKEEKKIVSLFTRLVNYLSIISNLNLQESSFTKCVEN
IANILNVLSGCFHAIYELYVMKSKEEHNLPTYTDRLKTTDDCLLTTVHSL
SSTATKLKSVFQQNVQFMTGFHGFKRKGLPSDDSQILTKPLKSFFTQAAS
YMQSISQDSAPSSVPYSLAVRNSRSLIASSDNNDTLKEQAATTQEALIRL
EQDKEHWMLEAQLVKAKFEKERKKTALLGEELKKCKTEALQIAIEENLST
INDIPDKPRNATRSTSSTTSSIQQDNASIHQVPLGTMEVFSKDKSGYMAE
SDHENLVKEHLTNRIAQLTKQLQITDSKCINFYHEAHSLYKQIVLADKNK
QKLTNEIVDSNKRVETLQDELETTKRSYEEQLRTLTDHLCGMNEKLTSQK
DEIDELKTGGGGSAKGSTLGGKFQLPGRKK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_033123	XLOC_033123	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00052397	TCONS_00052397	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019348	KLRAQ/TTKRSYEDQ_C

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 383..403
None	No IPR available	COILS	Coil	Coil	coord: 26..50
None	No IPR available	COILS	Coil	Coil	coord: 550..588
None	No IPR available	COILS	Coil	Coil	coord: 508..528
None	No IPR available	GENE3D	1.20.1170.10		coord: 432..622 e-value: 1.2E-5 score: 24.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 600..630
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 453..478
IPR019348	Uncharacterised domain KLRAQ/TTKRSYEDQ, C-terminal	PFAM	PF10212	TTKRSYEDQ	coord: 95..608 e-value: 7.2E-128 score: 427.7

Blast

[Close]

BLAST of TCONS_00052397-protein vs. Swiss-Prot (Human)
Match: PPR21 (Protein phosphatase 1 regulatory subunit 21 OS=Homo sapiens GN=PPP1R21 PE=1 SV=1)

HSP 1 Score: 330.102 bits (845), Expect = 5.034e-103
Identity = 204/615 (33.17%), Postives = 343/615 (55.77%), Query Frame = 0

Query:    8 LNAKVHKLEEDLKFAHIMSDKYQQQLKEAHQELRSKLDKTTKLMQEKVPFIDTENTMLNKLNIPVCDRNHQHTAQNFIESTCNQTIVLMAGLSDYHTYLEQRLKVYSLDIMHEKASASNTKFSSYLLQNAIYSRKVQHTLTELLDEAKQEVFISLSTLPSYGSFVNDLKSYVKYLEKLLPYRVLSVNEECQSSMWSENLEKTNNNLLKEEKKIVSLFTRLVNYLSIISNLNLQESSFTKCVENIANILNVLSGCFHAIYEL-------YVMKSKEEHNLPTYTDRLKTTDDCLLTTVHSLSSTATKLKSVFQQNVQFMTGFHGFKRKGLPSDDSQILTKPLKSFFTQAASYMQSISQDSAPSSVPYSLAVRNSRSLIASSDNNDTLKEQAATTQEALIRLEQDKEHWMLEAQLVKAKFEKERKKTALLGEELKKCKTEALQIAIEENLSTINDIPDKPRNATRSTSSTTSSIQQDNASIHQVPLGTMEVFSKDKSGYMAESDHENLVKEHLTNRIAQLTKQLQITDSKCINFYHEAHSLYKQIVLADKNKQKLTNEIVDSNKRVETLQDELETTKRSYEEQLRTLTDHLCGMNEKLTSQKDEIDELKTGGGGSAK 615
            L  K   LE++ K   + +++ Q QLK  H++L  +L+++  ++ EKVPF DT+ +  N LN+P+ +R HQ   ++           L+  L ++HTY EQR++++ +D   +  S  N KFS YL +NA Y R ++  +  L +   ++    L T     +F   L SY+ +L K+LPY++ S+ EEC+SS+ +  L   N  L ++ KK+ ++F +L  Y+++++  + +     +   N +++L  +    H  +++       Y  K+  EH LPT T +L TT+DC+L++V +L++ A K+ S F  N+ +      +  K      S +  + +  +  +AA+YM+S+ +     SVPY  A+ N R L++S+++ + L +Q   + E + +LEQ+KEHWMLEAQL K K EKE ++ A   ++LK   +  L    +EN +  N        A     +    IQ  +       +GT+   + D      ES  E+L+K H   RI +LT QLQ+ DSK ++FY E  +L K++ LA+K+K+ LT E+  +++ +  LQDEL TTKRSYE+QL  ++DHLC MNE L+ Q++EID LK    G++K
Sbjct:  179 LEVKSQTLEKEAKECRLRTEECQLQLKTLHEDLSGRLEESLSIINEKVPFNDTKYSQYNALNVPLHNRRHQLKMRDIAGQALAFVQDLVTALLNFHTYTEQRIQIFPVDSAIDTISPLNQKFSQYLHENASYVRPLEEGMLHLFESITEDTVTVLETTVKLKTFSEHLTSYICFLRKILPYQLKSLEEECESSLCTSALRARNLELSQDMKKMTAVFEKLQTYIALLALPSTEPDGLLRT--NYSSVLTNVGAALHGFHDVMKDISKHYSQKAAIEHELPTATQKLITTNDCILSSVVALTNGAGKIASFFSNNLDYFIASLSYGPKAASGFISPLSAECMLQYKKKAAAYMKSL-RKPLLESVPYEEALANRRILLSSTESREGLAQQVQQSLEKISKLEQEKEHWMLEAQLAKIKLEKENQRIA---DKLKNTGSAQLVGLAQENAAVSNTAGQDEATA----KAVLEPIQSTSL------IGTL-TRTSDSEVPDVES-REDLIKNHYMARIVELTSQLQLADSKSVHFYAECRALSKRLALAEKSKEALTEEMKLASQNISRLQDELTTTKRSYEDQLSMMSDHLCSMNETLSKQREEIDTLKMSSKGNSK 775

The following BLAST results are available for this feature:

BLAST of TCONS_00052397-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00052397-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
PPR21	5.034e-103	33.17	Protein phosphatase 1 regulatory subunit 21 OS=Hom...	[more]

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TCONS_00052397-protein (polypeptide) - C. hemisphaerica