Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00052730-protein ID=TCONS_00052730-protein|Name=TCONS_00052730-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1036bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00052730-protein vs. Swiss-Prot (Human)
Match: NU153 (Nuclear pore complex protein Nup153 OS=Homo sapiens GN=NUP153 PE=1 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 6.547e-26 Identity = 157/565 (27.79%), Postives = 238/565 (42.12%), Query Frame = 0 Query: 1 MSRSPFYTGGTTFGGANSYRETSGKRMKLSPVSNRVRTTRTLMKAKPLPNTKKNIVTSQTAKRILNTLGKMSSPVKDSKRIPRSVFTKPALSELVKNQAKVVSRQS-----ESVAPPVSSLN--KPLKIVS-KPENFQNKM---DSIRRFNQKSEVKTQPAQVPSFSFKQQTVPPLVAPPKQEIKIQQPP-KLPTAEPSKSS-------MKIKRDKMTSHFTMAKEPEVVNSMPEITSTAAPLPITV--MPTFNFAKSAL---------EKQKASN---IFSPSLNVTPILKPTQEKQQEIKTKIEPPIPFEIPKSVEVTKSTDGFTFATP-----EVKGTKSFSTPLLKDFVFS-TPVNLANKAKAT-SDIPKPTAKIEKLVVSTQXTKSFSTPLLKDFVFSTPVNLANKAKATSDIPKPTAKIEKLVVSTQPPIKPSPAPVIEQIVKPSTTIKPFKELKQNNDNATWSCPTCMIDNETTDLKCVACETAKPGLASVA-----STVKSSAKPTF---------EIKPLKNLSKPIEDWNCPTCMIDNSNDDLKCVACETAKPGS 511 + SPFY G TT+GGA + S +++ +P VR MKAK L + + VTS TA+RIL +L KMSSP+ D+KRIP S+ + P S L ++ + Q+ +S PPV L KP+ I + + F+ + R+ NQ+ + K ++ + P ++E P LP A S M+ +R + + + +E V +P+I+ LPIT +PTFNF+ + Q +N + SPS +P+ K + + + + PP S+ GFTF+ P E+ G+ S P++ T VN N K D P E L + +LK F++P K S +PTA T P + PA + LK ++W C TC++ N+ TD KC+AC+ AK A T S K T + KP+ I W+C TC++ N + +KCVACET KPG+ Sbjct: 254 LGDSPFYPGKTTYGGAAAAVRQS--KLRNTPYQAPVRRQ---MKAKQL-SAQSYGVTSSTARRILQSLEKMSSPLADAKRIP-SIVSSPLNSPLDRSGIDITDFQAKREKVDSQYPPVQRLMTPKPVSIATNRSVYFKPSLTPSGEFRKTNQRIDNKCSTGY-------EKNMTPGQNREQRESGFSYPNFSLPAANGLSSGVGGGGGKMRRERTRFVASKPLEEEEMEVPVLPKIS-----LPITSSSLPTFNFSSPEITTSSPSPINSSQALTNKVQMTSPSSTGSPMFKFSSPIVKSTEANVLPP-------------SSIGFTFSVPVAKTAELSGSSSTLEPIISSSAHHVTTVNSTNCKKTPPEDCEGPFRPAEILKEGSVLD------ILKSPGFASP-------KIDSVAAQPTA--------TSPVVYTRPAISSFSSSGIGFG----ESLKAG---SSWQCDTCLLQNKVTDNKCIACQAAKLSPRDTAKQTGIETPNKSGKTTLSASGTGFGDKFKPV------IGTWDCDTCLVQNKPEAIKCVACETPKPGT 752 HSP 2 Score: 110.923 bits (276), Expect = 1.566e-24 Identity = 202/685 (29.49%), Postives = 285/685 (41.61%), Query Frame = 0 Query: 427 ATWSCPTCMIDNETTDLKCVACETAKPGLASVASTVKSS--AKPTFEIKPLKNLSKPIEDWNCPTCMIDNSNDDLKCVACETAKPGSKS----------------------------------VSSETSF-----SGF--GKLSETGVKLPTDTGFKFNSVSTTGFKFG-NDNSSGFKFNSDSTTTGFKFQSTEN-------TGFKFGNDN--------------SSGFKFNSD---------STTTGFKFQSTENTGFKFPTKSVD-EPFKGDASAEKKTTEVSEPSKTNNLFGNSAPS-------FSFGKPTETEKAP----SFAFGKPSETEK---APSFSFGKPTATEKAPS----FSFGKSTDNEK----------ALSILSSSTSNEPAEVETPKPAFGSIAAAAAGGFLKVTGSSSVPFEPTITKTDPPKSTGFAFGQAS---SQSVFGST---SSSQSVLGS------TSKSESQPPAPSFNFGQTKSSTTSFGSTSSVFG--------QASTGSVFGTPVQSDSQSAAPSFNFGQSVTPAFNFGATQEKKEPQKTSLPSFGSSQPTESLFGAKKPEASAQPPFNFAAPSKPESAPVFGSAPTQPA----------ASFNFGASSTVPSF-ETKPSGFILSANNSANPTVSQPPAPSGGFNFSAPNASFSFGATTTN 977 +W C C + N D KCV+C + KPG + AS+ + + P+ L+ KP W+C C++ N D KC+ACE+AKPG+KS ++S +F GF G S++G P GFKF S FKFG + S + DS FKF + T F+FG N S+GF F + +T + +S+ N G TKS PF S KK E +K FGN P+ F G+ E ++ P S FGK ++ E+ P FSFG T+ S FSF + +EK A +S+T+++ A KP F + +++ T + F + + ++PP +T F FGQ+S S S FG+T S+SQS+L S T+ S P F FG SS +T+S FG A + VFGT + S S A FG + TP FG +Q +P P FGS + +LF P S P F S PVFG P+Q A ++F FG+S+T +F PSG NS+ P S P+ SGGF F+ A+F+ G+ N Sbjct: 795 GSWECSVCCVSNNAEDNKCVSCMSEKPGSSVPASSSSTVPVSLPSGGSLGLEKFKKPEGSWDCELCLVQNKADSTKCLACESAKPGTKSGFKGFDTSSSSSNSAASSSFKFGVSSSSSGPSQTLTSTGNFKFGDQGGFKIGVSSDSGSINPMSEGFKF-SKPIGDFKFGVSSESKPEEVKKDSKNDNFKFGLSSGLSNPVSLTPFQFGVSNLGQEEKKEELPKSSSAGFSFGTGVINSTPAPANTIVTSENKSSFNLG-TIETKSASVAPFTCKTSEAKK--EEMPATKGGFSFGNVEPASLPSASVFVLGRTEEKQQEPVTSTSLVFGKKADNEEPKCQPVFSFGNSEQTKDENSSKSTFSFSMTKPSEKESEQPAKATFAFGAQTSTTADQGAA----KPVFSFLNNSSSSSSTPATSAGGGIFGSSTSSSNPPVAT-FVFGQSSNPVSSSAFGNTAESSTSQSLLFSQDSKLATTSSTGTAVTP-FVFGPGASSNN---TTTSGFGFGATTTSSSAGSSFVFGTGPSAPSASPA----FGANQTP--TFGQSQGASQPNP---PGFGSISSSTALF----PTGSQPAPPTFGTVSSSSQPPVFGQQPSQSAFGSGTTPNSSSAFQFGSSTTNFNFTNNSPSGVFTFGANSSTPAASAQPSGSGGFPFNQSPAAFTVGSNGKN 1453 The following BLAST results are available for this feature:
BLAST of TCONS_00052730-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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