TCONS_00053073-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053073-protein
Unique NameTCONS_00053073-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length383

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053073-protein ID=TCONS_00053073-protein|Name=TCONS_00053073-protein|organism=Clytia hemisphaerica|type=polypeptide|length=383bp
IEQKFKHLESHLNVCPEMMVDCKNPECQVRMFRKEVPLHLKNECLYEPVK
CKFASLGCTGMIQWMDKKTHDQEFAAIHNKMLLEKHIETSRELHQTRDEM
KDMKSKINSLIGFKENQAEISDAYSLIKETEAELIAVKAELQKTKTELTS
TKIEHLKTKNELQEVRIEVADLNNHCNQLYQLVEHSSDIVCSHLLNEKES
EIVFENKTFENLVPLLVKKNYLALAKSQNLHYDKAAAVFGEQEFKFNKLN
VINNFYPYEYVYKTLLSIMDVGDIHQRSTNEFFFKFNILDYESVYADFGN
VEFLASRRKSGDVAYINKNFLLVAENSNRCSLRFQIEGFDEENSKLYILN
PKCFQRRLLIFDWNDKITEKNDSGEVLFYLVRN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033519XLOC_033519Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053073TCONS_00053073Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001293Znf_TRAF
IPR013083Znf_RING/FYVE/PHD
IPR008974TRAF-like
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 127..147
NoneNo IPR availableCOILSCoilCoilcoord: 155..182
NoneNo IPR availableGENE3D1.10.287.620coord: 78..188
e-value: 4.9E-5
score: 22.4
IPR001293Zinc finger, TRAF-typePFAMPF02176zf-TRAFcoord: 11..70
e-value: 5.3E-12
score: 46.1
IPR001293Zinc finger, TRAF-typePROSITEPS50145ZF_TRAFcoord: 10..59
score: 13.802
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 30..70
e-value: 8.7E-9
score: 35.0
coord: 2..29
e-value: 4.1E-6
score: 26.4
IPR008974TRAF-likeSUPERFAMILY49599TRAF domain-likecoord: 5..68

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053073-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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