TCONS_00053147-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053147-protein
Unique NameTCONS_00053147-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length726

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053147-protein ID=TCONS_00053147-protein|Name=TCONS_00053147-protein|organism=Clytia hemisphaerica|type=polypeptide|length=726bp
FSGSIHTKEKKNKKKINDFQMYLHLLNKASIHASCLRNGLSKVPGGLSLS
RNTLLQHGSSCIRTQSRTFLQKAFKASQTTAKPSTLNCGNILKSICYSSG
FLIFPFSKNLFFKTAQCERLKLSHKTRISSLHDQKQNKKDAKFNWAMLWE
LMKPDIMWFVFAAVCAFAVALVNVKIPLLLGGLVNSITTLLRHESEIGDV
FEELYGPCKKLVISYIIQSSLTFLYITSLSCFGERLAARLRIKLFQNLME
QDVVFFDEHKTGEVINRLTTDIQDFKSSFKQVVSQGLRSVTQAIGGGMTL
YALSPKLTYLMLLVLPGIIMVGTGLGSLLRKLSKDAQEQISLAMAIADEA
VGNIRTVRAFAMENKEIGWYAKEIQESRFQYEILGAGIGAFQALSNFAIN
GIILLVLYTGTVLIDRKEMAAGDLMSYLVATQSIQKSLSTISILFGQMVR
GMSSGARVFEYMESRPSMRLSGGLRIDKSALKGHIEFKNVSFAYPTRADQ
VVIEDLSLNIEPGKTVALCGSSGSGKSTIAALIERFYDVQGGEVIIDGLN
IKELDPSWVRGELIGYINQEPTLFATTVMENIRYGSPMATDQEVYEAAKC
ANADEFIKGFPQGYNTVVGERGATVSGGQKQRIAIARALLKNPKILILDE
ATSALDAESERIVQSALDNLIKGRTVIVIAHRLSTIQNADLIAAISKGKI
VEMGSHSQLLEKNGLYADLIRRQTQG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033547XLOC_033547Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053147TCONS_00053147Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR003439ABC_transporter-like
IPR011527ABC1_TM_dom
IPR017871ABC_transporter_CS
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0016887ATPase activity
GO:0005524ATP binding
GO:0042626ATPase activity, coupled to transmembrane movement of substances
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
biological_process GO:0006810 transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0016887 ATPase activity
molecular_function GO:0042626 ATPase activity, coupled to transmembrane movement of substances
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 512..715
e-value: 2.9E-18
score: 76.7
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 504..653
e-value: 4.9E-33
score: 114.4
IPR003439ABC transporter-likePROSITEPS50893ABC_TRANSPORTER_2coord: 485..722
score: 23.936
IPR011527ABC transporter type 1, transmembrane domainPFAMPF00664ABC_membranecoord: 160..432
e-value: 7.9E-43
score: 147.0
IPR011527ABC transporter type 1, transmembrane domainPROSITEPS50929ABC_TM1Fcoord: 160..450
score: 43.688
IPR011527ABC transporter type 1, transmembrane domainSUPERFAMILY90123ABC transporter transmembrane regioncoord: 148..466
NoneNo IPR availableGENE3D1.20.1560.10coord: 135..467
e-value: 4.2E-66
score: 222.6
NoneNo IPR availableGENE3D3.40.50.300coord: 474..726
e-value: 5.3E-79
score: 264.7
NoneNo IPR availableCDDcd03249ABC_MTABC3_MDL1_MDL2coord: 485..723
e-value: 1.04144E-139
score: 411.933
IPR017871ABC transporter, conserved sitePROSITEPS00211ABC_TRANSPORTER_1coord: 625..639
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 480..723

Blast
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BLAST of TCONS_00053147-protein vs. Swiss-Prot (Human)
Match: ABCB8 (ATP-binding cassette sub-family B member 8, mitochondrial OS=Homo sapiens GN=ABCB8 PE=1 SV=3)

HSP 1 Score: 633.254 bits (1632), Expect = 0.000e+0
Identity = 313/583 (53.69%), Postives = 423/583 (72.56%), Query Frame = 0 
Query:  141 AKFNWAMLWELMKPDIMWFVFAAVCAFAVALVNVKIPLLLGGLVNSITTLLRHESEIGDVFEELYGPCKKLVISYIIQSSLTFLYITSLSCFGERLAARLRIKLFQNLMEQDVVFFDEHKTGEVINRLTTDIQDFKSSFKQVVSQGLRSVTQAIGGGMTLYALSPKLTYLMLLVLPGIIMVGTGLGSLLRKLSKDAQEQISLAMAIADEAVGNIRTVRAFAMENKEIGWYAKEIQESRFQYEILGAGIGAFQALSNFAINGIILLVLYTGTVLIDRKEMAAGDLMSYLVATQSIQKSLSTISILFGQMVRGMSSGARVFEYMESRPSMRLSGGLRIDKSALKGHIEFKNVSFAYPTRADQVVIEDLSLNIEPGKTVALCGSSGSGKSTIAALIERFYDVQGGEVIIDGLNIKELDPSWVRGELIGYINQEPTLFATTVMENIRYGSPMATDQEVYEAAKCANADEFIKGFPQGYNTVVGERGATVSGGQKQRIAIARALLKNPKILILDEATSALDAESERIVQSALDNLIKGRTVIVIAHRLSTIQNADLIAAISKGKIVEMGSHSQLLEKNGLYADLIRRQ 723
            ++FNW + W+ + P ++    A V A   ALVNV+IPLLLG LV  +    R    +G    E       L+I Y +Q  LTF Y+  LS  GER+A  +R  LF +L+ QD+ FFD +KTG++++RLTTD+Q+FKSSFK V+SQGLRS TQ  G  ++L  LS +LT L+++  P ++ VGT +GS LRKLS+  QEQI+ AM +ADEA+GN+RTVRAFAME +E   Y  E++  R + E LG GI  FQ LSN A N ++L  L+ G  L+  +++  GDLMS+LVA+Q++Q+S++ +S+LFGQ+VRG+S+GARVFEYM   P + LSGG  + K  L+G + F+NV F+YP R    V++D +L + PGK VAL G SG GK+T+A+L+ERFYD   G V++DG +++ LDPSW+RG+++G+I+QEP LF TT+MENIR+G   A+D+EVY AA+ ANA EFI  FP+GYNTVVGERG T+SGGQKQR+AIARAL+K P +LILDEATSALDAESER+VQ ALD    GRTV+VIAHRLST++ A  I  ++ G++ E G+H +LL+K GLYA+LIRRQ
Sbjct:  130 SRFNWKLFWQFLHPHLLVLGVAVVLALGAALVNVQIPLLLGQLVEVVAKYTR--DHVGSFMTESQNLSTHLLILYGVQGLLTFGYLVLLSHVGERMAVDMRRALFSSLLRQDITFFDANKTGQLVSRLTTDVQEFKSSFKLVISQGLRSCTQVAGCLVSLSMLSTRLTLLLMVATPALMGVGTLMGSGLRKLSRQCQEQIARAMGVADEALGNVRTVRAFAMEQREEERYGAELEACRCRAEELGRGIALFQGLSNIAFNCMVLGTLFIGGSLVAGQQLTGGDLMSFLVASQTVQRSMANLSVLFGQVVRGLSAGARVFEYMALNPCIPLSGGCCVPKEQLRGSVTFQNVCFSYPCRPGFEVLKDFTLTLPPGKIVALVGQSGGGKTTVASLLERFYDPTAGVVMLDGRDLRTLDPSWLRGQVVGFISQEPVLFGTTIMENIRFGKLEASDEEVYTAAREANAHEFITSFPEGYNTVVGERGTTLSGGQKQRLAIARALIKQPTVLILDEATSALDAESERVVQEALDRASAGRTVLVIAHRLSTVRGAHCIVVMADGRVWEAGTHEELLKKGGLYAELIRRQ 710
The following BLAST results are available for this feature:
BLAST of TCONS_00053147-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ABCB80.000e+053.69ATP-binding cassette sub-family B member 8, mitoch... [more]
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