TCONS_00053333-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053333-protein
Unique NameTCONS_00053333-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length493

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053333-protein ID=TCONS_00053333-protein|Name=TCONS_00053333-protein|organism=Clytia hemisphaerica|type=polypeptide|length=493bp
MNGINDEDVNARDEGGDGGGCGSGGGIFVDSPLIIDVVNHHAADDTHSID
SEKARMISEEIGDESRVMKNILNDYQGRFSIFRDGILKLKHYYDTQMVLI
KSHFHKTNSDESYQTSPSSKDFFIGKIVQIMELALKQILSLMDASDMTRS
FADETIDVLDQDVEGDIEVTEPKITKKFSVDEESRQGSSTQLFPPMISAD
DNTQQVASQQHPIGFPNASCSILSPQFDIPYDTGQEDNTNQQTVEPQPQT
VSNSEVIPPRLPSNSEVIPPRLPSNSELMPPLQIGASSASTSQQHHFDSK
NPKSNDVADSNRYNPIILQDGRNNSIATANNDYLESNMADFGLLPPGTGE
QFVCPYCKFTFTTKRDMDRHLRSHTGEKPFHCEVCSKYFARKDFLTKHKL
THTGEKPYSCEQCNKRFSQRSNLNKHLLTHTKEHKHICKICQRGFHQMIN
LHRHEQIHCNVSKQFQCVWCTKMAYQGPDCFKTFLDKREAANG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033656XLOC_033656Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053333TCONS_00053333Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 352..374
e-value: 6.3E-5
score: 32.4
coord: 436..458
e-value: 0.58
score: 19.2
coord: 380..402
e-value: 0.071
score: 22.2
coord: 408..430
e-value: 1.4E-4
score: 31.3
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 382..402
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 438..458
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 354..374
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 410..430
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 408..435
score: 14.253
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 352..379
score: 14.336
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 436..463
score: 9.619
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 380..407
score: 15.251
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 402..454
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 360..417
NoneNo IPR availableGENE3D3.30.160.60coord: 451..490
e-value: 0.0036
score: 17.2
NoneNo IPR availableGENE3D2.20.25.10coord: 402..414
e-value: 5.9E-10
score: 38.5
NoneNo IPR availableGENE3D3.30.160.60coord: 386..401
e-value: 9.7E-12
score: 44.3
NoneNo IPR availableGENE3D3.30.160.60coord: 203..362
e-value: 6.8E-7
score: 28.8
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 408..430
e-value: 1.2E-5
score: 25.4
coord: 352..374
e-value: 5.2E-4
score: 20.2
NoneNo IPR availableGENE3D2.40.155.10coord: 363..385
e-value: 5.9E-13
score: 48.9
NoneNo IPR availableGENE3D3.30.160.60coord: 415..425
e-value: 1.2E-7
score: 31.1
NoneNo IPR availableGENE3D3.30.160.60coord: 426..450
e-value: 3.3E-10
score: 39.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 179..311

Blast
[Close]
BLAST of TCONS_00053333-protein vs. Swiss-Prot (Human)
Match: ZN793 (Zinc finger protein 793 OS=Homo sapiens GN=ZNF793 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 1.212e-26
Identity = 52/107 (48.60%), Postives = 65/107 (60.75%), Query Frame = 0 
Query:  352 FVCPYCKFTFTTKRDMDRHLRSHTGEKPFHCEVCSKYFARKDFLTKHKLTHTGEKPYSCEQCNKRFSQRSNLNKHLLTHTKEHKHICKICQRGFHQMINLHRHEQIH 458
            F C +C   FT K     H R+HTGE+PF C  C K F  K +L  H+  HTGE+PY C +C K FSQ+S LNKH  THT E  + C  C + F+Q  NL RH++IH
Sbjct:  283 FECFFCGKAFTQKSHRTEHQRTHTGERPFVCSECGKSFGEKSYLNVHRKMHTGERPYRCRECGKSFSQKSCLNKHWRTHTGEKPYGCNECGKAFYQKPNLSRHQKIH 389

HSP 2 Score: 96.6709 bits (239), Expect = 1.234e-21
Identity = 52/133 (39.10%), Postives = 74/133 (55.64%), Query Frame = 0 
Query:  348 TGEQ-FVCPYCKFTFTTKRDMDRHLRSHTGEKPFHCEVCSKYFARKDFLTKHKLTHTGEKPYSCEQCNKRFSQRSNLNKHLLTHTKEHKHICKICQRGFHQMINLHRHEQIHCNVSKQFQCVWCTKMAYQGPD 479
            TGE+ + C  C   F+ K  + +H R HTG +PF C  C K F +K   T+H+ THTGE+P+ C +C K F ++S LN H   HT E  + C+ C + F Q   L++H + H    K + C  C K  YQ P+
Sbjct:  250 TGEKPYGCTDCGKAFSHKSTLIKHQRIHTGVRPFECFFCGKAFTQKSHRTEHQRTHTGERPFVCSECGKSFGEKSYLNVHRKMHTGERPYRCRECGKSFSQKSCLNKHWRTH-TGEKPYGCNECGKAFYQKPN 381

HSP 3 Score: 90.8929 bits (224), Expect = 9.647e-20
Identity = 49/127 (38.58%), Postives = 69/127 (54.33%), Query Frame = 0 
Query:  346 PGTGEQFVCPYCKFTFTTKRDMDRHLRSHTGEKPFHCEVCSKYFARKDFLTKHKLTHTGEKPYSCEQCNKRFSQRSNLNKHLLTHTKEHKHICKICQRGFHQMINLHRHEQIHCNVSKQFQCVWCTK 472
            P T +  VC  C   F  K +  RH RSHTGEKP+ C  C K F+ K  L KH+  HTG +P+ C  C K F+Q+S+  +H  THT E   +C  C + F +   L+ H ++H    + ++C  C K
Sbjct:  221 PPTEKPHVCSECGKAFCYKSEFIRHQRSHTGEKPYGCTDCGKAFSHKSTLIKHQRIHTGVRPFECFFCGKAFTQKSHRTEHQRTHTGERPFVCSECGKSFGEKSYLNVHRKMH-TGERPYRCRECGK 346

HSP 4 Score: 85.1149 bits (209), Expect = 8.060e-18
Identity = 40/87 (45.98%), Postives = 55/87 (63.22%), Query Frame = 0 
Query:  348 TGEQ-FVCPYCKFTFTTKRDMDRHLRSHTGEKPFHCEVCSKYFARKDFLTKHKLTHTGEKPYSCEQCNKRFSQRSNLNKHLLTHTKE 433
            TGE+ FVC  C  +F  K  ++ H + HTGE+P+ C  C K F++K  L KH  THTGEKPY C +C K F Q+ NL++H   H ++
Sbjct:  306 TGERPFVCSECGKSFGEKSYLNVHRKMHTGERPYRCRECGKSFSQKSCLNKHWRTHTGEKPYGCNECGKAFYQKPNLSRHQKIHARK 392
The following BLAST results are available for this feature:
BLAST of TCONS_00053333-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN7931.212e-2648.60Zinc finger protein 793 OS=Homo sapiens GN=ZNF793 ... [more]
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