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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00053339-protein ID=TCONS_00053339-protein|Name=TCONS_00053339-protein|organism=Clytia hemisphaerica|type=polypeptide|length=554bp
YCNTPETIPQCIAFLEKSKTPIRSIFFKSKNTPTVDSSYKFESIIDHRRK
INRSRPGSAESSPYKEQPKSLKKTPFQESFQRSHSQPDFIIRQTVETKPE
LKSDYRSLREENKELANLLGQMTKENKELKRLEEEAERYRLQKRNTIIQL
QSSGFADECLSRAQSLDDLAKFNVVQPKKATRRSQSESALEELEHEIMED
VPEVCDLSWFKDNYWYPWLDESYKDQMTNSEQDDDSLCFRLDKEISRSSS
VANTSGDDEDQWVYRKEVFTEADQRYQKIVVEIEDLTKKIEESINSNLIG
FHYCRRGACYRKVGDLQNAIQDLNTAIKLEPKLIDAYWHRHLVYLLKNDV
TKALEDLSHITTVNHDYCNAYKSRAEIFIANGDVALAISSYSQAIRIKPK
SPELYYARAELLEERGDIILALEDYKSANQHDQTNTNAIKKIGMYHFKTK
SWIASVNDFTELLSREPKNAEAFLFRGCANSKMFNFEAAIRDFSISISLQ
PDNYLPFYHRACLLRKVLPKQAIRDFSVSLLLDSSLGNVSSFIHRGILYA
QLER Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 98..149 |
| None | No IPR available | GENE3D | 1.20.58.280 | | coord: 282..351
e-value: 2.0E-11
score: 43.2 |
| None | No IPR available | PFAM | PF13414 | TPR_11 | coord: 310..346
e-value: 2.1E-7
score: 30.4
coord: 377..414
e-value: 1.4E-7
score: 30.9 |
| None | No IPR available | GENE3D | 1.25.40.120 | | coord: 440..554
e-value: 6.8E-13
score: 47.9 |
| None | No IPR available | GENE3D | 1.20.120.330 | | coord: 48..153
e-value: 0.049
score: 12.7 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 47..88 |
| None | No IPR available | SUPERFAMILY | 81901 | HCP-like | coord: 303..511 |
| IPR019734 | Tetratricopeptide repeat | SMART | SM00028 | tpr_5 | coord: 436..469
e-value: 45.0
score: 9.2
coord: 402..435
e-value: 1.6
score: 17.7
coord: 334..367
e-value: 91.0
score: 6.5
coord: 300..333
e-value: 9.5E-5
score: 31.8
coord: 470..503
e-value: 0.0069
score: 25.6
coord: 368..401
e-value: 0.0069
score: 25.6 |
| IPR019734 | Tetratricopeptide repeat | PROSITE | PS50005 | TPR | coord: 300..333
score: 9.706 |
| IPR019734 | Tetratricopeptide repeat | PROSITE | PS50005 | TPR | coord: 436..469
score: 7.375 |
| IPR019734 | Tetratricopeptide repeat | PROSITE | PS50005 | TPR | coord: 402..435
score: 6.726 |
| IPR019734 | Tetratricopeptide repeat | PROSITE | PS50005 | TPR | coord: 470..503
score: 8.939 |
| IPR019734 | Tetratricopeptide repeat | PROSITE | PS50005 | TPR | coord: 334..367
score: 5.31 |
| IPR019734 | Tetratricopeptide repeat | PROSITE | PS50005 | TPR | coord: 368..401
score: 9.263 |
| IPR011990 | Tetratricopeptide-like helical domain | GENE3D | 1.25.40.10 | | coord: 387..439
e-value: 3.1E-13
score: 49.1 |
| IPR027363 | Methylthioribose-1-phosphate isomerase-like, N-terminal domain | GENE3D | 1.20.120.420 | | coord: 352..386
e-value: 9.3E-5
score: 22.1 |
| IPR013026 | Tetratricopeptide repeat-containing domain | PROSITE | PS50293 | TPR_REGION | coord: 300..503
score: 35.434 |
Blast
The following BLAST results are available for this feature:
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