TCONS_00053374-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053374-protein
Unique NameTCONS_00053374-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length194

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053374-protein ID=TCONS_00053374-protein|Name=TCONS_00053374-protein|organism=Clytia hemisphaerica|type=polypeptide|length=194bp
MRFNESVQILHHTWLDICSVFYKRYPNPQSKHVLGEDVIKRSLDENNVLK
TTRIFAKTNEVPGWLMKFLPTATVYILEESHIDIQNHLITTYTRNITHNT
LLSVEERCVFSIDTDNKELTSVQRRAWIESYFPGLKPVFERFGLSRYNSN
IQRMHRGFTSVLGGDSSTRRTSTTATSQYRQSDVHVSNGIQSTL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033688XLOC_033688Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053374TCONS_00053374Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006797PRELI/MSF1_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006797PRELI/MSF1 domainPFAMPF04707PRELIcoord: 18..163
e-value: 6.6E-40
score: 136.4
IPR006797PRELI/MSF1 domainPROSITEPS50904PRELI_MSF1coord: 1..170
score: 36.909
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 162..194

Blast
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BLAST of TCONS_00053374-protein vs. Swiss-Prot (Human)
Match: PRLD1 (PRELI domain-containing protein 1, mitochondrial OS=Homo sapiens GN=PRELID1 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 1.141e-42
Identity = 62/158 (39.24%), Postives = 98/158 (62.03%), Query Frame = 0 
Query:    9 ILHHTWLDICSVFYKRYPNPQSKHVLGEDVIKRSLDENNVLKTTRIFAKTNEVPGWLMKFLPTA---TVYILEESHIDIQNHLITTYTRNITHNTLLSVEERCVFSIDTDNKELTSVQRRAWIESYFPGLKPVFERFGLSRYNSNIQRMHRGFTSVLG 163
            +L  +W  + + F++RYPNP SKHVL ED++ R +  +  L + R+  KTN +P W  +  P     +VY+LE+S +D QN  +TT+T NI H  L+ VEERCV+ +++DN   T ++R AW+ S   G+    + FGL+R+ SN+ +  +GF  +L 
Sbjct:   10 VLRSSWDQVFAAFWQRYPNPYSKHVLTEDIVHREVTPDQKLLSRRLLTKTNRMPRWAERLFPANVAHSVYVLEDSIVDPQNQTMTTFTWNINHARLMVVEERCVYCVNSDNSGWTEIRREAWVSSSLFGVSRAVQEFGLARFKSNVTKTMKGFEYILA 167
The following BLAST results are available for this feature:
BLAST of TCONS_00053374-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PRLD11.141e-4239.24PRELI domain-containing protein 1, mitochondrial O... [more]
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