TCONS_00053646-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053646-protein
Unique NameTCONS_00053646-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1509

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053646-protein ID=TCONS_00053646-protein|Name=TCONS_00053646-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1509bp
MGRKFIYEPNTKGYEEIKKNHFIICFDPQVEPYRQHFLCCVCNKIITRFI
ECLSHCNSSKHKKEVAGKWRKLQSFACQKCHTQAQLSNFTAFCQWTVLKN
NQALTKEDHNIRLEILKRVGKTLHNAGLKGASVSLYGSSDTLLGFKYSDV
NLHITLKHFNKLDPELGVTDASSLFWHSHEALSKSDQFSDFEQHFTRKYA
EFIFKDKESGCTCTVKLQVDPLLKSHDLIKKYVTMDERVKELFMLIRTWC
KTIGVCNREAGGIPSFNLLLLTLHYLQQTNPPVIPVIKTGNVVDLNERVI
IDPAQEKNFCIDPHKVSSWKSENTEDVGKLWLGWMRFYISEFSRKALVVN
IRQHTPLSRSHKEFASRRFAIEDPYNLKENISKYASNAVVGYFLDSIEVS
YKYFTSYCQCKGPRLRDYEIFDQWNKAPPKGKVEPDTRNEKSHKEPQETS
DESDSLKKRVRYVSTEDSGGDVDDDVIFESSESEAKESEDDADVGGKEEE
DFVKIPANENEDENENENENDETSQQQTSSSEGDFVKITSTDQTDTNADT
DKANEPLSPPSEEGSSVESFVEVDGNSSSSLLEAPKQSLQMPEDEMVSVI
SDAIGEIVEPTKTQDIQDTELNEIVEKIINLPLDDNDANENRDTSKPENV
PISSDSGKTGSRQNSCTQEIMKYEFKVKHLRPKMAVPLYCRECCQDGHTF
KDCPHLNVDVPALPAMTGDFLKKVDEVCLGIMSDMELKPHEFEIRMKVLQ
ELEAYLKLNYKKDCQLVLFGSSVNGFGSSGSDLDICLLFKHNQEHPPDVD
SVDVIKHVQKALERQAQYHKVYAIKTSKVPIVKFCVNVHPKQELEGDISF
YNTLAIHNSTMLSTYALIDYRVRALGYCLKVFAKRCEIGDASRGSLSSYA
YILLLLFYLQRCSPPVIPVLQELYDRTDEKKPERMVEGCNTWFFNDVPNL
KEKWDGVGKNTQSTGELFIGFFRFYIEEFDFLKLVVAPKQTKPLYKYEKS
WNSAIIAIEDPFLLRHNLGAGISRNMFHFIRQCFIKARSHFGDSTRSVPN
TKNVKVLQDNFFNPHLILGDERVPTNRLCRRCGRIGHIAANCAEKVAIDR
DRRRVNSENDQLEDNKQKHQDQPQDIRDIRDRNDGGDPQTPKDKSRFYKC
PNCRQQGHRRQDCPKKRGGRGDRADPNDMVCYHCNKKGHQKRSCPEYERT
CHECGEKGHVKSKCPRLKNQSGYSSDEGRLGRHIPRGKSFEDSPIIDRPS
IRSQQPAHPQSAPQLKLQMPARPPTPKSSLTPDRSMPNMQFPQMSPVTPI
SYTHQQLSDLFKPLENKGVGGTGIFPPNSKFVPPQNMPNTQGSQPFQHMA
QQVNNQQGNFDFKMFANRFNETRKQSPQQAPVGTPPPPQHHNHQSKHRGG
TGYQDPSIRFSSPQGGNQHNRKQQPPIGHQHGSHSNNKRNHGHRHPGNKP
TTALEHELDLFLDRNNTPTRENVRRTLYDDEYPTLDDRPNPGMQQQRSRN
DSGNYPHRR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033838XLOC_033838Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053646TCONS_00053646Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR002934Polymerase_NTP_transf_dom
IPR002058PAP_assoc
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003676nucleic acid binding
GO:0016779nucleotidyltransferase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0016779 nucleotidyltransferase activity
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1095..1122
NoneNo IPR availableGENE3D3.30.460.10coord: 746..838
e-value: 1.5E-5
score: 24.5
NoneNo IPR availableGENE3D1.10.1410.10coord: 201..411
e-value: 6.2E-25
score: 87.2
coord: 839..1056
e-value: 4.2E-39
score: 133.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 634..664
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1372..1509
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1208..1291
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 426..592
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1103..1178
NoneNo IPR availableCDDcd05402NT_PAP_TUTasecoord: 744..866
e-value: 8.33546E-31
score: 118.429
NoneNo IPR availableSUPERFAMILY81631PAP/OAS1 substrate-binding domaincoord: 238..410
NoneNo IPR availableSUPERFAMILY81301Nucleotidyltransferasecoord: 718..866
NoneNo IPR availableSUPERFAMILY81631PAP/OAS1 substrate-binding domaincoord: 871..1043
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 1078..1094
e-value: 0.0057
score: 25.0
coord: 1200..1216
e-value: 0.033
score: 20.3
coord: 1180..1196
e-value: 0.0047
score: 25.6
coord: 689..705
e-value: 4.1
score: 7.5
coord: 1149..1165
e-value: 0.018
score: 21.9
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 1078..1093
e-value: 9.0E-4
score: 19.1
coord: 1180..1196
e-value: 0.0015
score: 18.5
IPR001878Zinc finger, CCHC-typeGENE3D4.10.60.10coord: 412..709
e-value: 0.018
score: 14.5
coord: 1190..1209
e-value: 1.1E-10
score: 40.8
IPR001878Zinc finger, CCHC-typeGENE3D4.10.60.10coord: 1069..1166
e-value: 1.4E-10
score: 40.3
IPR001878Zinc finger, CCHC-typeGENE3D4.10.60.10coord: 1210..1279
e-value: 0.0035
score: 16.9
IPR001878Zinc finger, CCHC-typeGENE3D4.10.60.10coord: 1167..1189
e-value: 5.6E-5
score: 22.8
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 1149..1165
score: 9.092
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 1201..1216
score: 9.735
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 1079..1094
score: 9.405
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 1181..1196
score: 10.032
IPR001878Zinc finger, CCHC-typeSUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 1174..1216
IPR002934Polymerase, nucleotidyl transferase domainPFAMPF01909NTP_transf_2coord: 757..844
e-value: 6.9E-6
score: 26.2
IPR002058PAP/25A-associatedPFAMPF03828PAP_assoccoord: 326..377
e-value: 3.1E-6
score: 27.2
coord: 965..1016
e-value: 9.8E-10
score: 38.4

Blast
BLAST of TCONS_00053646-protein vs. Swiss-Prot (Human)
Match: TUT4 (Terminal uridylyltransferase 4 OS=Homo sapiens GN=ZCCHC11 PE=1 SV=3)

HSP 1 Score: 380.563 bits (976), Expect = 9.274e-109
Identity = 215/524 (41.03%), Postives = 308/524 (58.78%), Query Frame = 0
Query:  649 NVPISSDSGKTGSRQNSCTQEIMKYEFKVKHLRPKMAVPLYCRECCQDGHTFKDCPH--LNVDVPALPAMTGDFLKKVDEVCLGIMSDMELKPHEFEIRMKVLQELEAYLKLNYKKDCQLVLFGSSVNGFGSSGSDLDICLLFKHNQEHPPDVDSVDVIKHVQKALERQAQYHKVYAIKTSKVPIVKFCVNVHPKQELEGDISFYNTLAIHNSTMLSTYALIDYRVRALGYCLKVFAKRCEIGDASRGSLSSYAYILLLLFYLQRCSPPVIPVLQELYDRTDEKKPERMVEGCNTWFFNDVPNLKEKWDGVGKNTQSTGELFIGFFRFYIEEFDFLKLVVAPKQTKPLYKYEKSWNSAIIAIEDPFLLRHNLGAGISRNMFHFIRQCFIKARSHFGDSTRSVPNTKNVKVLQDNFFNPHLILGDERVPTNRLCRRCGRIGHIAANCAEKVAIDRDRRRVNSENDQLEDNKQKHQDQPQDIRDIRDRNDGGDPQTPKDKSRFYKCPNCRQQGHRRQDCPKKRGGR 1170
            N   + D+       N  TQE+  Y F    L       + C  C +DGH+  DCP     +D+  LP MT  F + +D VC     ++     E   R ++L  LE +++  Y +  +L LFGSS NGFG   SDLDIC+  +   E+   ++  ++I+++ K L+R      +  I T+KVPIVKF    H +  LEGDIS YNTLA HN+ ML+TYA ID RV+ LGY +KVFAKRC+IGDASRGSLSSYAYIL++L++LQ+  PPVIPVLQE++D   ++ P+RMV+G N +FF+    LK++   +GKNT+S GEL++G  RFY EEFDF + V++ +Q K L  +EK W S  IAIEDPF L HNLGAG+SR M +FI + FI  R  FG      P    +    + FF+  ++   E  P +R CR CG+IGH   +C ++ ++     R+  ++ + E    + +   +D+ D RD +D  D + P+D     +C  C   GH R++CP+ +  R
Sbjct:  875 NCKATEDASDLNDDDNLPTQELY-YVFDKFILTSGKPPTIVCSICKKDGHSKNDCPEDFRKIDLKPLPPMTNRFREILDLVCKRCFDELSPPCSEQHNREQILIGLEKFIQKEYDEKARLCLFGSSKNGFGFRDSDLDICMTLE-GHENAEKLNCKEIIENLAKILKRHPGLRNILPITTAKVPIVKF---EHRRSGLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCDIGDASRGSLSSYAYILMVLYFLQQRKPPVIPVLQEIFD--GKQIPQRMVDGWNAFFFDKTEELKKRLPSLGKNTESLGELWLGLLRFYTEEFDFKEYVISIRQKKLLTTFEKQWTSKCIAIEDPFDLNHNLGAGVSRKMTNFIMKAFINGRKLFG-----TPFYPLIGREAEYFFDSRVLTDGELAPNDRCCRVCGKIGHYMKDCPKRKSL---LFRLKKKDSEEEKEGNEEEKDSRDVLDPRDLHDTRDFRDPRD----LRCFICGDAGHVRRECPEVKLAR 1379          

HSP 2 Score: 124.79 bits (312), Expect = 1.833e-28
Identity = 104/420 (24.76%), Postives = 174/420 (41.43%), Query Frame = 0
Query:   37 FLCCVCNKIITRFIECLSHCNSSKHKKEVAGKWRK--LQSFACQKCHTQAQLSNFTAFCQWTVLKNNQALTKEDHNIRLEILKRVGKTLHNAGLKGASVSLYGSSDTLLGFKYSDVNLHITLKHFNKLDPELGVTDASSLFWHSHEALSKSDQFSDFEQHFTRKYAEFIFKDKESGCTCTVKLQVDPLLKSHDLIKKYVTMDERVKELFMLIRTWCKTIGVCNREAGGIPSFNLLLLTLHYLQQTNPPVIPVIKTGNVVDLNERVIID-------------------PAQEKNFCIDPHKVS-----------------------------SWKSENTEDVGKLWLGWMRFYISEFSRKALVVNIRQHTPLSRSHKEFASRRFAIEDPYNLKENISK-YASNAVVGYFLDSIEVSYKYFT 405
            +LC +C   I        H    +HKK +  K  +  L+S         A LS   A  +   L     +T +D  +R EI++ + K +    L   S+ LYGSS T    K SDVN+ I      K  P++   D   L       L K+  + D E  F  K    + +D++SG  C V    D    + DL+     ++     L +  R W K   + ++  GGIPS+   L+ + +LQQ  PP++P +    +   + + + D                    A EKN   + +K                               + ++ N   +G+LWL  ++FY  +F+ +  V+ +R    L+R +K +  RR AIEDP+++K N+++   S  V  Y ++    +Y+YF 
Sbjct:  304 YLCKLCLIHIENIQGAHKHIKEKRHKKNILEKQEESELRSLPPPSPAHLAALS--VAVIE---LAKEHGITDDDLRVRQEIVEEMSKVI-TTFLPECSLRLYGSSLTRFALKSSDVNIDI------KFPPKMNHPD---LLIKVLGILKKNVLYVDVESDFHAKVPVVVCRDRKSGLLCRVSAGNDMACLTTDLLTALGKIEPVFIPLVLAFRYWAKLCYIDSQTDGGIPSYCFALMVMFFLQQRKPPLLPCLLGSWIEGFDPKRMDDFQLKGIVEEKFVKWECNSSSATEKNSIAEENKAKADQPKDDTKKTETDNQSNAMKEKHGKSPLALETPNRVSLGQLWLELLKFYTLDFALEEYVICVRIQDILTRENKNWPKRRIAIEDPFSVKRNVARSLNSQLVYEYVVERFRAAYRYFA 708          

HSP 3 Score: 112.079 bits (279), Expect = 1.432e-24
Identity = 80/306 (26.14%), Postives = 141/306 (46.08%), Query Frame = 0
Query:  107 EDHNIRLEILKRVGKTLHNAGLKGASVSLYGSSDTLLGFKYSDVNLHITLKHFNKLDPELGVTDASSLFWHSHEALSKSDQFSDFEQHFTRKYAEFIFKDKESGCTCTVKLQVDPLLKSHDLIKKYVTMDERVKELFMLIRTWCKTIGVCNREAGGIPSFNLLLLTLHYLQQTNPPVIPVIKT--------GNVVDLNERVIIDPAQEKNFCIDPHKVSSWKSENTEDVGKLWLGWMRFYISEFSRKALVVNIRQHTPLSRSHKEFASRRFAIEDPYNLKENISKYASNAVVGYFLDSIEVSYKYF 404
            E HN R +IL  + K +     + A + L+GSS    GF+ SD+++ +TL+     +      +   +  +  + L +     +     T K     F+ + SG    + L       +  ++  Y  +D RV+ L   ++ + K   + +   G + S+  +L+ L++LQQ  PPVIPV++           +VD       D  +E        ++ S   +NTE +G+LWLG +RFY  EF  K  V++IRQ   L+   K++ S+  AIEDP++L  N+    S  +  + + +     K F
Sbjct:  968 EQHN-REQILIGLEKFIQKEYDEKARLCLFGSSKNGFGFRDSDLDICMTLEGHENAEK----LNCKEIIENLAKILKRHPGLRNILPITTAKVPIVKFEHRRSGLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCDIGDASRGSLSSYAYILMVLYFLQQRKPPVIPVLQEIFDGKQIPQRMVDGWNAFFFDKTEELK-----KRLPSL-GKNTESLGELWLGLLRFYTEEFDFKEYVISIRQKKLLTTFEKQWTSKCIAIEDPFDLNHNLGAGVSRKMTNFIMKAFINGRKLF 1262          
The following BLAST results are available for this feature:
BLAST of TCONS_00053646-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TUT49.274e-10941.03Terminal uridylyltransferase 4 OS=Homo sapiens GN=... [more]
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