TCONS_00054213-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00054213-protein
Unique Name	TCONS_00054213-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	362

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00054213-protein ID=TCONS_00054213-protein|Name=TCONS_00054213-protein|organism=Clytia hemisphaerica|type=polypeptide|length=362bp
IQNILKFVFHYSFSVMHEQEKDNCILALQNIPKGCEVGIDYHSWYVGERF
KGISNIPPGIHFVFVRVTDKYGEMAPRSGFFVYMNPGEIISKSFKQDDEE
FEHIQDNIPIDEMIGLLAQMAPYPYKECQLWSQLTFHVSSPLLKRLQPAS
KKVCSYTEVAIEKDKVTAGRLGRMLMKTDTRTIELESNDDDNRINFTKVP
KPESMTGPDLSKNIMDSSVCLEALIKAIPEGEVGLLGEIQLAYVTFILGQ
VYDAFEHWKQLLSLIGGCMVALTKRSSFYEKFIDVIGLQLDEIPEDFFLE
INPQKNVIFLIFQDFFQNLNECDDLTNALLKKSSMMKERLFQRFHWEFND
VLEDEMPTIVEL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_034196	XLOC_034196	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00054213	TCONS_00054213	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007946	AAR2
IPR033648	AAR2_C
IPR033647	Aar2_N

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007946	A1 cistron-splicing factor, AAR2	PFAM	PF05282	AAR2	coord: 26..349 e-value: 6.3E-74 score: 249.4
IPR033648	AAR2, C-terminal	CDD	cd13778	Aar2_C	coord: 193..348 e-value: 7.69376E-33 score: 119.707
IPR033647	AAR2, N-terminal	CDD	cd13777	Aar2_N	coord: 24..146 e-value: 6.31756E-34 score: 122.014

Blast

[Close]

BLAST of TCONS_00054213-protein vs. Swiss-Prot (Human)
Match: AAR2 (Protein AAR2 homolog OS=Homo sapiens GN=AAR2 PE=1 SV=2)

HSP 1 Score: 196.438 bits (498), Expect = 2.138e-59
Identity = 122/366 (33.33%), Postives = 192/366 (52.46%), Query Frame = 0

Query:   22 DNCILALQNIPKGCEVGIDYHSWYVGERFKGISNIPPGIHFVFVRVTDKYG--EMAPRSGFFVYMNPGEIISKSFKQDDEEFEHIQDNIPIDEMIGLLAQM-------APYPYKECQLWSQLTFHVSSPLLKRLQPASKKVCSYTEV-AIEKDKVTAGRLGRMLMKTD----------TRTIELESNDDDNRINFTKVPK---PESMTGPDLSKNIMDSSVCLEALI-KAIPEGEVGLLGEIQLAYVTFILGQVYDAFEHWKQLLSLIGGCMVALTKRSSFYEKFIDVIGLQLDEIPEDFFLEINPQKNVIFLIFQDFFQNLNECDDLTNALL-KKSSMMKERLFQRFHWEFNDVLEDEMPTIVEL 362
            +   + + N+PKG E GIDY+SW VG +F+G+  IPPGIHF+     DK    E+ PR GFF+ ++   +    +    EE +      P  E+  + A +        PYPY   + W  LT  +S   +++LQP ++++C++++V  +   K T  R+G+ L +             R  E++       I F+++P    PE  T  +++K+ MD S  LE ++ K  P     +LGE+Q A+V F+LG VY+AFEHWK+LL+L+     A+ K  + Y   I ++  QL EIP DFF++I  Q N +    Q FF   + C    +A L KK+   +  L ++F W+F    ED  P +VEL
Sbjct:   17 EGATVVILNMPKGTEFGIDYNSWEVGPKFRGVKMIPPGIHFLHYSSVDKANPKEVGPRMGFFLSLHQRGLTVLRWSTLREEVD--LSPAPESEVEAMRANLQELDQFLGPYPYATLKKWISLTNFISEATVEKLQPENRQICAFSDVLPVLSMKHTKDRVGQNLPRCGIECKSYQEGLARLPEMKPRAG-TEIRFSELPTQMFPEGATPAEITKHSMDLSYALETVLNKQFPSSPQDVLGELQFAFVCFLLGNVYEAFEHWKRLLNLLCRSEAAMMKHHTLYINLISILYHQLGEIPADFFVDIVSQDNFLTSTLQVFFS--SACSIAVDATLRKKAEKFQAHLTKKFRWDFAAEPEDCAPVVVEL 377

The following BLAST results are available for this feature:

BLAST of TCONS_00054213-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00054213-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
AAR2	2.138e-59	33.33	Protein AAR2 homolog OS=Homo sapiens GN=AAR2 PE=1 ...	[more]

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TCONS_00054213-protein (polypeptide) - C. hemisphaerica