TCONS_00054529-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00054529-protein
Unique Name	TCONS_00054529-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1162

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00054529-protein ID=TCONS_00054529-protein|Name=TCONS_00054529-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1162bp
MDHLDLALNLQQEAVYSSSNTNNDEGGGEMSDRVSTLASGIYAEFERMIQ
KYGSDVVENLMPMIVNVLEQLESSYSEGGEATMELEMLAEDNEQLITQYE
REKQLRKLAEAKYLEYEDSREQHQQDLQSVIDQLEHSRRQSETKAKQLQD
QVERYEERISEQKKEYDTLHNRHSEMLHKYMERMELQSKLSPLPSTPDNV
KLRKTKQGSELLSASQTELGASNTDENNLRSSSVTEIQVTSDFLTPGESR
NDLSFEDEISLQVTTQDASTPLKTKKKLLASSREFLDTIEAESSQAEKLN
VTSSERGGVDFNEDDMNTVSEKTDSASMFISPEAKAILDATPELSQVESK
FNELEISEYQTPTIDIRSAQKLNQQNISLLAEMEQYDDALTVEQQGLKEF
DRLLVENKDLIDVRSKLQTQKNELIRRMEEISGDREIQEEEIKALQTTKT
RMKLKMTELEQSLKKVRLENEKAQLTLKNKIAEERISSANRKRFTRVEMA
KVLMERNQYKERLMELQEAVRWTEMIRASKENHLNAVQQKKKSSIWRLFS
NLFAGGGTSSSANTSPKKSAASTPQEPINVWYGGGANNQNQMQMQRRHTL
SAQPSRYSGAESGFEGMTEKQRQERKERYKYVKEHINSEGRKQAYGWSLP
SDFSGEQVGSSIVPVPVYCRPLNTEAAMKIWCASGINLEGGRTPDGNFIG
LPMDFKESCHSTVWIGTSTHSCSKVTIIDANNPSVALDQFIVSSSHLLCM
ASVPGLSKDDNKRDPDVVDSPRKSGRQTSPEHSGSIMGIQAEEESYPDED
SVDGSQPTKVTSMLPTMWLGAQSGKVYIHSVVANWKKCLQSAKLKDSLLS
IVHTQGRVLAALADGTVAIFHRKPDGRWDLSNYHLLDLGRPHHSIRCMTT
VHHLVWCGYRNKVQVINPRTMKIEKSFDAHPRRESQVRQLACIGDGVWVS
IRLDSTLRLYNAHTYHHLQDVDIEPYVSKMLGTSKFGFSFVRITALLLTD
DRLWVGTGNGIILSVPLVSARPTRENDNGKAVVPIDIPNKGALFMPYCAM
VHAQLSFHGHRDSVKFFIAVPGSAANIEAAKAYSNAGARPPSPSNVKPGE
VNFANLLVMSGGEGYIDFRVGDDESEDKANMSSSETSPASSKLVAVERSH
LLVWQINNRKDS

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_034382	XLOC_034382	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00054529	TCONS_00054529	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR032486	JIP_LZII
IPR019143	JNK/Rab-associated_protein-1_N
IPR015943	WD40/YVTN_repeat-like_dom
IPR034743	RH1
IPR034744	RH2
IPR017986	WD40_repeat_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 499..519
None	No IPR available	COILS	Coil	Coil	coord: 369..389
None	No IPR available	COILS	Coil	Coil	coord: 407..492
None	No IPR available	COILS	Coil	Coil	coord: 85..172
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 208..233
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 296..315
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 758..787
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 557..578
IPR032486	JNK-interacting protein, leucine zipper II	PFAM	PF16471	JIP_LZII	coord: 398..464 e-value: 1.6E-12 score: 47.3
IPR019143	JNK/Rab-associated protein-1, N-terminal	PFAM	PF09744	Jnk-SapK_ap_N	coord: 34..187 e-value: 8.3E-46 score: 156.0
IPR015943	WD40/YVTN repeat-like-containing domain	GENE3D	2.130.10.10		coord: 703..1161 e-value: 2.6E-17 score: 62.2
IPR034743	RH1 domain	PROSITE	PS51776	RH1	coord: 17..105 score: 22.925
IPR034744	RH2 domain	PROSITE	PS51777	RH2	coord: 491..561 score: 22.25
IPR017986	WD40-repeat-containing domain	SUPERFAMILY	50978	WD40 repeat-like	coord: 777..1036

Blast

[Close]

BLAST of TCONS_00054529-protein vs. Swiss-Prot (Human)
Match: JIP4 (C-Jun-amino-terminal kinase-interacting protein 4 OS=Homo sapiens GN=SPAG9 PE=1 SV=4)

HSP 1 Score: 484.952 bits (1247), Expect = 2.430e-150
Identity = 222/375 (59.20%), Postives = 273/375 (72.80%), Query Frame = 0

Query:  797 PDEDSVDGSQPTKVTSMLPTMWLGAQSGKVYIHSVVANWKKCLQSAKLKDSLLSIVHTQGRVLAALADGTVAIFHRKPDGRWDLSNYHLLDLGRPHHSIRCMTTVHHLVWCGYRNKVQVINPRTMKIEKSFDAHPRRESQVRQLACIGDGVWVSIRLDSTLRLYNAHTYHHLQDVDIEPYVSKMLGTSKFGFSFVRITALLLTDDRLWVGTGNGIILSVPLVSARPTR--------------ENDNGKAVVPIDIPNKGALFMPYCAMVHAQLSFHGHRDSVKFFIAVPGSAANIEAAKAYSNAGARPPSPSNVKPG-EVNFANLLVMSGGEGYIDFRVGDDESEDKANMSSSETSPASSKLVAVERSHLLVWQI 1156
            P+E  +   +  K++S+LPTMWLGAQ+G +Y+HS VA W+KCL S KLKDS+LSIVH +G VL ALADGT+AIFHR  DG+WDLSNYHLLDLGRPHHSIRCMT VH  VWCGYRNK+ V+ P+ MKIEKSFDAHPR+ESQVRQLA +GDGVWVSIRLDSTLRLY+AHTY HLQDVDIEPYVSKMLGT K GFSFVRITAL+++ +RLWVGTGNG+I+S+PL     T                ++N   V P         F+PYC+M HAQL FHGHRD+VKFF+AVPG   + +++ + ++       PS  +PG +    ++LV+SGGEGYIDFR+GD+  E +      E  P    +   ERSHL+VWQ+
Sbjct:  952 PNEQDLVREEAQKMSSLLPTMWLGAQNGCLYVHSSVAQWRKCLHSIKLKDSILSIVHVKGIVLVALADGTLAIFHRGVDGQWDLSNYHLLDLGRPHHSIRCMTVVHDKVWCGYRNKIYVVQPKAMKIEKSFDAHPRKESQVRQLAWVGDGVWVSIRLDSTLRLYHAHTYQHLQDVDIEPYVSKMLGTGKLGFSFVRITALMVSCNRLWVGTGNGVIISIPLTETNKTSGVPGNRPGSVIRVYGDENSDKVTP-------GTFIPYCSMAHAQLCFHGHRDAVKFFVAVPGQVISPQSSSSGTDLTGDKAGPSAQEPGSQTPLKSMLVISGGEGYIDFRMGDEGGESEL---LGEDLPLEPSVTKAERSHLIVWQV 1316

HSP 2 Score: 420.624 bits (1080), Expect = 1.252e-126
Identity = 315/851 (37.02%), Postives = 461/851 (54.17%), Query Frame = 0

Query:   27 GGEMSDRVSTLASGIYAEFERMIQKYGSDVVENLMPMIVNVLEQLESSYSEGGEATMELEMLAEDNEQLITQYEREKQLRKLAEAKYLEYEDSREQHQQDLQSVIDQLEHSRRQSETKAKQLQDQVERYEERISEQKKEYDTLHNRHSEMLHKYMERME------------LQSK--------------LSPLPS-----TPDNVKLRKTKQGSELLS-------ASQTELGASNTDENNLRSSSVTEI----QVTSDFLTPGESRNDLSFEDEISLQVTTQDASTPLKTKKKLLASSREFLDTIEAESSQAEKLNVTSSERGGVDFNEDDMNTVSEKTDSASMFISPEAKAILDATPELSQVESKFNELEISEYQ---TPTIDIRSA----------QKLNQQNISLLAEMEQYDDALTVEQQGLKEFDRLLVENKDLIDVRSKLQTQKNELIRRMEEISGDREIQEEEIKALQTTKTRMKLKMTELEQSLKKVRLENEKAQLTLKNKIAEERISSANRKRFTRVEMAKVLMERNQYKERLMELQEAVRWTEMIRASKENHLNAVQQKKKSSIWRLFSNLFAGGGTSSSANTSPKKSAASTPQEPINVWYGGGANNQNQMQMQRRHTLSAQPSRYSGAESGFEGMTEK-------QRQERKERYKYVKEHINSE-GRKQAYGWSLPSDFSGEQVGSS-----IVPVPVYCRPLN-TEAAMKIWCASGINLEGGRTPD-GNFIGLPMDFK-------------------------------------ESCHSTVWIGTSTHSCSKVTIIDANNPSVALDQFIVSSSHLLCMASVPGLSKDDNKRDPDVVDS 770
            G  MS+RVS LA  IY EFER+I +Y  +VV+ LMP++V VLE L+S +++  E  +ELE+L +DNEQLITQYEREK LRK AE K++E+EDS+EQ ++DLQ+ ++ LE   RQ E KAK   DQ+ R EER +E KKEY+ LH RH+EM+H YME +E            L+S               + PLP+     TPD  K  +T  GSE           S T L  SN+ E         E+    Q  S   TP  + N           V T    TPLK + +      +  +  ++E S+  ++ V    R        +++T S + +  S     E +AI+++TPEL        + ++S Y+   TPT  I +           ++L+     L+ ++++  D L +     +E + L++EN  L++ ++ L   KN+LI +++E++ ++++ + E++A++  K +++ K  ELE+ L+K R E E A+   K+   +  I +A RKRFTRVEMA+VLMERNQYKERLMELQEAVRWTEMIRAS+EN   A+Q+KK+SSIW+ FS L      SSS+NT+ K      P+ P+N+ Y    ++      +R  TLS  P   S A   F+ ++E+       +R++++E+Y+ VK H+  E GR QA+GWSLP  +     G        +PVPVY RPL+  + +MK+WCA G+NL GG+T D G+ +G  + +K                                     E   S VWI TSTHS +KV IIDA  P   LD F V +SH+LC+ASVPG  + D     D+ +S
Sbjct:   17 GAVMSERVSGLAGSIYREFERLIGRYDEEVVKELMPLVVAVLENLDSVFAQDQEHQVELELLRDDNEQLITQYEREKALRKHAEEKFIEFEDSQEQEKKDLQTRVESLESQTRQLELKAKNYADQISRLEEREAELKKEYNALHQRHTEMIHNYMEHLERTKLHQLSGSDQLESTAHSRIRKERPISLGIFPLPAGDGLLTPDAQKGGETP-GSEQWKFQELSQPRSHTSLKVSNSPEPQKAVEQEDELSDVSQGGSKATTPASTANS---------DVATIPTDTPLKEENEGFVKVTDAPN--KSEISKHIEVQVAQETR--------NVSTGSAENEEKS-----EVQAIIESTPELDM------DKDLSGYKGSSTPTKGIENKAFDRNTESLFEELSSAGSGLIGDVDEGADLLGMG----REVENLILENTQLLETKNALNIVKNDLIAKVDELTCEKDVLQGELEAVKQAKLKLEEKNRELEEELRKARAEAEDARQKAKDD-DDSDIPTAQRKRFTRVEMARVLMERNQYKERLMELQEAVRWTEMIRASREN--PAMQEKKRSSIWQFFSRL-----FSSSSNTTKK------PEPPVNLKYNAPTSHVTPSVKKRSSTLSQLPGDKSKA---FDFLSEETEASLASRREQKREQYRQVKAHVQKEDGRVQAFGWSLPQKYKQVTNGQGENKMKNLPVPVYLRPLDEKDTSMKLWCAVGVNLSGGKTRDGGSVVGASVFYKDVAGLDTEGSKQRSASQSSLDKLDQELKEQQKELKNQEELSSLVWICTSTHSATKVLIIDAVQPGNILDSFTVCNSHVLCIASVPGARETDYPAGEDLSES 815

The following BLAST results are available for this feature:

BLAST of TCONS_00054529-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00054529-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
JIP4	2.430e-150	59.20	C-Jun-amino-terminal kinase-interacting protein 4 ...	[more]

You are here

TCONS_00054529-protein (polypeptide) - C. hemisphaerica