TCONS_00054824-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054824-protein
Unique NameTCONS_00054824-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1105

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054824-protein ID=TCONS_00054824-protein|Name=TCONS_00054824-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1105bp
MIGFSTGYLVVISTHLKEIGQELFQTRDHKDELTDIDISLSLKMAASCGD
GCIKLHDLNDLKEIQAIINVEDIGRAKLDKVQWTEDGQLLAVTTTQGAVH
VYLTKLPILGASYETKVAYLTSLREITITDEVANTSPIKIPTQVEPNFIA
LYQDNLACGMNNRVWFCKLAEFNGTPFHDREYLGTVNQVRLNKDYAAVGF
EGRAQLHLIQGDLGENSEEEREGRLFPDEGDKSKITSFTLTGDFFIYSNE
GGHIKFFYLEDWQYVNEYRHVVGIRKIFPDEAGTKVIYIDDKSDGFIYCT
VSDGVHEIQSFPPAVKGVLWDQGFLDENVFCVYDEDKLYLYSYSKDTVAG
TDCALACSAKLSFGYSPVMMHNGRVTCQTQAGKLMSVELIPNNVSDVHDS
TKAKNNLKNMLTLKRFKEAWTICEKLKTPEHWEMLAEVATRQLDINFAIR
VYRHIGNVSMVIYLEKLKKMEDKNLLAGYVAMTLKDFNLAQDLFLLSGRP
QAALEMRRDLLHWDQALELAKALAPEEMPFISKEYAQQLEFTGDYPNALL
HFENGITNESDFKDHDEICTGGVARMAIRMGDIRRGVNLASKSSSKALKK
ECASLLENMKQYNESAILYEKSQSWDKAASVYIKLKQWNKVGELLKYITT
PKLLMQYAKAKEHDGKYKEAATAYKKAKDYESVIRINLDHLQNPEEAVNL
VKETQSVEGARMVAKFFQDLGDFASAIQFLVMSKCADEAFKIAQQYDQME
QYAEIIGDQATQEDNNSIAVYFENKRKYLLAGKFFMFAGQYQKALSHLLR
CPVTENGESVELSIQTVKKANDEKLIMHLIDFLMGELDGMPKDSKYLFRL
YMAIEKFTEAAKTAIIIAQSEQEMGNYRNAHDVLFSMYKELRERKIKIPN
EMNQNLMLLHSYIVCKIHIKRGDHLKGARMLIRVANNISKFPAHIVPILT
STVVECHRAGLKHSSFSFAAMLMRPEYRSQIDVKYKKKIEMIVRKPDKTE
EEEPLDACPFCSYPVPQTQLDCPECKQHLPYCVVTGRHMLKDDWCNCPNC
SFPALSSEFKNLLEGEETKCPMCAEKVTINSLKPVPDPSIYLRDEVAVPA
VPDEL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034537XLOC_034537Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054824TCONS_00054824Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom
IPR011990TPR-like_helical_dom
IPR017986WD40_repeat_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 595..615
NoneNo IPR availablePFAMPF15911WD40_3coord: 265..321
e-value: 1.0E-23
score: 83.0
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 129..374
e-value: 2.7E-4
score: 19.6
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 1..126
e-value: 8.3E-8
score: 30.9
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 593..1011
e-value: 4.3E-16
score: 58.5
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 375..592
e-value: 0.023
score: 13.9
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 527..564
coord: 609..680
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 21..347

Blast
[Close]
BLAST of TCONS_00054824-protein vs. Swiss-Prot (Human)
Match: WDR19 (WD repeat-containing protein 19 OS=Homo sapiens GN=WDR19 PE=1 SV=2)

HSP 1 Score: 1336.63 bits (3458), Expect = 0.000e+0
Identity = 634/1099 (57.69%), Postives = 829/1099 (75.43%), Query Frame = 0 
Query:    1 MIGFSTGYLVVISTHLKEIGQELFQTRDHKDELTDIDISLSLKMAASCGDGCIKLHDLNDLKEIQAIINVEDIGRAKLDKVQWTEDGQLLAVTTTQGAVHVYLTKLPILGASYETKVAYLTSLREITITDEVANTSPIKIPTQVEPNFIALYQDNLACGMNNRVWFCKLAEFNGTPFHDREYLGTVNQVRLNKDYAAVGFEGRAQLHLIQGDLGENSEEEREGRLFPDEGDKSKITSFTLTGDFFIYSNEGGHIKFFYLEDWQYVNEYRHVVGIRKIFPDEAGTKVIYIDDKSDGFIYCTVSDGVHEIQSFPPAVKGVLWDQGFLDENVFCVYDEDKLYLYSYSKDTVAGTDCALACSAKLSFGYSPVMMHNGRVTCQTQAGKLMSVELIPNN-VSDVHDST--KAKNNLKNMLTLKRFKEAWTICEKLKTPEHWEMLAEVATRQLDINFAIRVYRHIGNVSMVIYLEKLKKMEDKNLLAGYVAMTLKDFNLAQDLFLLSGRPQAALEMRRDLLHWDQALELAKALAPEEMPFISKEYAQQLEFTGDYPNALLHFENGITNESDFKDHDEICTGGVARMAIRMGDIRRGVNLASKSSSKALKKECASLLENMKQYNESAILYEKSQSWDKAASVYIKLKQWNKVGELLKYITTPKLLMQYAKAKEHDGKYKEAATAYKKAKDYESVIRINLDHLQNPEEAVNLVKETQSVEGARMVAKFFQDLGDFASAIQFLVMSKCADEAFKIAQQYDQMEQYAEIIGDQ-ATQEDNNSIAVYFENKRKYLLAGKFFMFAGQYQKALSHLLRCPVTENGESVELSIQTVKKANDEKLIMHLIDFLMGELDGMPKDSKYLFRLYMAIEKFTEAAKTAIIIAQSEQEMGNYRNAHDVLFSMYKELRERKIKIPNEMNQNLMLLHSYIVCKIHIKRGDHLKGARMLIRVANNISKFPAHIVPILTSTVVECHRAGLKHSSFSFAAMLMRPEYRSQIDVKYKKKIEMIVRKPDKTEEEEPLDACPFCSYPVPQTQLDCPECKQHLPYCVVTGRHMLKDDWCNCPNCSFPALSSEFKNLLEGEETKCPMCAEKVTINSLKPVPDPSIYLRDE 1095
            MIGFS G+ VVISTH  E+GQE+FQ R+HKD LT I +S +L   A+CGD CIK+ DL DLK++  I+N+++  +  L  + WT+DGQLLA++T +G++HV+LTKLPILG +  T++AYLTSL E+T+ + V    PI +   VEPNF+A+   +LA GMNNR WF  L E       D EYLGTV  + L+ DYAA  FEG+ QLHLI+ ++  +++EERE RLFP   DK +I    LT DF IY  + G +++FY+EDWQ+VN+YRH V ++KIFPD  GT++++ID+KSDGF+YC V+D  +EI  F P +KGVLW+   +D+ VF  YD+DK+Y Y + KDT+ G    LA S K+ F + P++++NG +TCQTQ+GK+ ++ L  +  +S++ D+   + +  L   L LKRF +AW +C  L     W  LA      +++ FAIRVYR IGNV +V+ LE++K +ED NLLAG++AM   D+NLAQDL+L S  P AALEMRRDL HWD AL+LAK LAP+++PFISKEYA QLEF GDY NAL H+E GIT   D K+HDE C  GVA+M+IRMGDIRRGVN A K  S+ LK++C ++LENMKQ++E+A LYEK   +DKAASVYI+ K W KVG+LL ++++PK+ +QYAKAKE DG+YKEA  AY+ AK ++SVIRI LDHL NPE+AVN+V+ETQS++GA+MVA+FF  LGD+ SAIQFLVMSKC +EAF +AQQ+++ME YA+IIG +  T ED  SIA+YFE +++YL AGKFF+  GQY +AL H L+CP +E+  ++E++I+TV +A DE L   LID L+GE DGMPKD+KYLFRLYMA++++ EAA+TAIIIA+ EQ  GNYRNAHDVLFSMY EL+ +KIKIP+EM  NLM+LHSYI+ KIH+K GDH+KGARMLIRVANNISKFP+HIVPILTSTV+ECHRAGLK+S+FSFAAMLMRPEYRS+ID KYKKKIE +VR+PD +E EE    CPFC + +P+ +L CP CK  +PYC+ TGRHMLKDDW  CP+C FPAL SE K +L  E T CPMC+E++    LK + D + YLR E
Sbjct:  246 MIGFSCGHFVVISTHTGELGQEIFQARNHKDNLTSIAVSQTLNKVATCGDNCIKIQDLVDLKDMYVILNLDEENKG-LGTLSWTDDGQLLALSTQRGSLHVFLTKLPILGDACSTRIAYLTSLLEVTVANPVEGELPITVSVDVEPNFVAVGLYHLAVGMNNRAWFYVLGENAVKKLKDMEYLGTVASICLHSDYAAALFEGKVQLHLIESEI-LDAQEERETRLFPAVDDKCRILCHALTSDFLIYGTDTGVVQYFYIEDWQFVNDYRHPVSVKKIFPDPNGTRLVFIDEKSDGFVYCPVNDATYEIPDFSPTIKGVLWENWPMDKGVFIAYDDDKVYTYVFHKDTIQGAKVILAGSTKVPFAHKPLLLYNGELTCQTQSGKVNNIYLSTHGFLSNLKDTGPDELRPMLAQNLMLKRFSDAWEMCRILNDEAAWNELARACLHHMEVEFAIRVYRRIGNVGIVMSLEQIKGIEDYNLLAGHLAMFTNDYNLAQDLYLASSCPIAALEMRRDLQHWDSALQLAKHLAPDQIPFISKEYAIQLEFAGDYVNALAHYEKGIT--GDNKEHDEACLAGVAQMSIRMGDIRRGVNQALKHPSRVLKRDCGAILENMKQFSEAAQLYEKGLYYDKAASVYIRSKNWAKVGDLLPHVSSPKIHLQYAKAKEADGRYKEAVVAYENAKQWQSVIRIYLDHLNNPEKAVNIVRETQSLDGAKMVARFFLQLGDYGSAIQFLVMSKCNNEAFTLAQQHNKMEIYADIIGSEDTTNEDYQSIALYFEGEKRYLQAGKFFLLCGQYSRALKHFLKCPSSEDNVAIEMAIETVGQAKDELLTNQLIDHLLGENDGMPKDAKYLFRLYMALKQYREAAQTAIIIAREEQSAGNYRNAHDVLFSMYAELKSQKIKIPSEMATNLMILHSYILVKIHVKNGDHMKGARMLIRVANNISKFPSHIVPILTSTVIECHRAGLKNSAFSFAAMLMRPEYRSKIDAKYKKKIEGMVRRPDISEIEEATTPCPFCKFLLPECELLCPGCKNSIPYCIATGRHMLKDDWTVCPHCDFPALYSELKIMLNTEST-CPMCSERLNAAQLKKISDCTQYLRTE 1339
The following BLAST results are available for this feature:
BLAST of TCONS_00054824-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
WDR190.000e+057.69WD repeat-containing protein 19 OS=Homo sapiens GN... [more]
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