TCONS_00055442-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055442-protein
Unique NameTCONS_00055442-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length106

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055442-protein ID=TCONS_00055442-protein|Name=TCONS_00055442-protein|organism=Clytia hemisphaerica|type=polypeptide|length=106bp
MKQEDLLKLGASFLAGSVTAFVALKVVIPKLSGCSASEGRFNTAHELDKA
KVVNSYDIEDLGDKVAFCRCWKSKKFPYCDGTHNAHNKLTGDNLGPVCLS
RKESTA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034889XLOC_034889Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055442TCONS_00055442Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018967FeS-contain_CDGSH-typ
Vocabulary: Cellular Component
TermDefinition
GO:0043231intracellular membrane-bounded organelle
Vocabulary: Molecular Function
TermDefinition
GO:00515372 iron, 2 sulfur cluster binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018967Iron sulphur-containing domain, CDGSH-typeSMARTSM00704znf_cdgshcoord: 51..89
e-value: 3.8E-19
score: 79.6
IPR018967Iron sulphur-containing domain, CDGSH-typePFAMPF09360zf-CDGSHcoord: 53..84
e-value: 2.3E-11
score: 43.6

Blast
[Close]
BLAST of TCONS_00055442-protein vs. Swiss-Prot (Human)
Match: CISD1 (CDGSH iron-sulfur domain-containing protein 1 OS=Homo sapiens GN=CISD1 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 9.733e-25
Identity = 33/57 (57.89%), Postives = 47/57 (82.46%), Query Frame = 0 
Query:   48 DKAKVVNSYDIEDLGDKVAFCRCWKSKKFPYCDGTHNAHNKLTGDNLGPVCLSRKES 104
            D  K+V+++D+EDLGDK  +CRCW+SKKFP+CDG H  HN+ TGDN+GP+ + +KE+
Sbjct:   52 DNPKIVHAFDMEDLGDKAVYCRCWRSKKFPFCDGAHTKHNEETGDNVGPLIIKKKET 108
The following BLAST results are available for this feature:
BLAST of TCONS_00055442-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CISD19.733e-2557.89CDGSH iron-sulfur domain-containing protein 1 OS=H... [more]
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