TCONS_00055631-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055631-protein
Unique NameTCONS_00055631-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length317

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055631-protein ID=TCONS_00055631-protein|Name=TCONS_00055631-protein|organism=Clytia hemisphaerica|type=polypeptide|length=317bp
MQDHEKFFHHFKMNMKLLTLLVALLPLLVATNDTTQMKAQIQALTTLVSQ
QGQLIQKLVKKDRTRDGYCQFKVNPCGDCMCFEDLRMVEKYYCDCREKPI
RRDCKEHYDQGERTNGIYRINKNLKILMIQVFCDQTTDGGGWTVVQRRVD
GSDNFLRNWAEYRVGFGLLHREHFLGNRNIYLLTAQAYWKGSELRVDMVS
KGSSSRLWAKYSSFEVNNEASGFELHVSGYSGNALDRLTYQHGMKFTTYD
KEHDNWSGGNCAIRNAGGWWYDDCATANLNGNYDQFQSIAQSCSSDCSSV
FWQPYHLKYSEMKIRRV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035003XLOC_035003Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055631TCONS_00055631Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014715Fibrinogen_a/b/g_C_2
IPR014716Fibrinogen_a/b/g_C_1
IPR020837Fibrinogen_CS
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 99..317
e-value: 2.0E-72
score: 256.6
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 101..315
e-value: 3.1E-52
score: 177.5
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 95..317
score: 46.708
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainCDDcd00087FReDcoord: 102..317
e-value: 7.11893E-82
score: 248.694
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 96..316
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 245..314
e-value: 7.8E-20
score: 70.3
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 28..244
e-value: 7.2E-56
score: 188.7
IPR020837Fibrinogen, conserved sitePROSITEPS00514FIBRINOGEN_C_1coord: 269..281

Blast
[Close]
BLAST of TCONS_00055631-protein vs. Swiss-Prot (Human)
Match: FBCD1 (Fibrinogen C domain-containing protein 1 OS=Homo sapiens GN=FIBCD1 PE=1 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 3.914e-49
Identity = 124/333 (37.24%), Postives = 166/333 (49.85%), Query Frame = 0 
Query:   16 KLLTLLVALLPLLVATNDTTQMKAQI---------QALTTLVSQQGQLIQKLVKKDRTRDGYCQFKVNPCGDCM-CFEDLRMV--EKYYCDCREKPIR-------------RDCKEHYDQGERTNGIYRINKNLKILMIQVFCDQTTDGGGWTVVQRRVDGSDNFLRNWAEYRVGFGLLHREHFLGNRNIYLLTAQAYWKGSELRVDMVSKGSSSRLWAKYSS-----FEVNNEASGFELHVSGYSGNALDRLTYQHGMKFTTYDKEHDNWSGGNCAIRNAGGWWYDDCATANLNGNYDQFQSIAQSCSSDCSS-VFWQPYHLKYSEMKIRRV 317
            +LL  L   LP L+A     Q +            Q L+ L S+QG+LIQ L +      G+    VN   D +   +  R +   +   D +  P R             RDC +    G++ +G+Y +         QV+CD  TDGGGWTV QRR DGS NF R W  YR GFG L  EH+LG + I+ LT QA +   EL VD+     +   +A+Y S     F V+ E  G+ L V+ YSG A D L    GM+FTT D++ D+ S  NCA    G WWY +C T+NLNG Y +    + +   + SS   WQ Y LK+SEMKIR V
Sbjct:  135 ELLDTLADQLPRLLARASELQTECMGLRKGHGTLGQGLSALQSEQGRLIQLLSESQ----GHMAHLVNSVSDILDALQRDRGLGRPRNKADLQRAPARGTRPRGCATGSRPRDCLDVLLSGQQDDGVYSVFPTHYPAGFQVYCDMRTDGGGWTVFQRREDGSVNFFRGWDAYRDGFGRLTGEHWLGLKRIHALTTQAAY---ELHVDL-EDFENGTAYARYGSFGVGLFSVDPEEDGYPLTVADYSGTAGDSLLKHSGMRFTTKDRDSDH-SENNCAAFYRGAWWYRNCHTSNLNGQYLRGAHASYADGVEWSSWTGWQ-YSLKFSEMKIRPV 457
The following BLAST results are available for this feature:
BLAST of TCONS_00055631-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FBCD13.914e-4937.24Fibrinogen C domain-containing protein 1 OS=Homo s... [more]
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