TCONS_00055861-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055861-protein
Unique NameTCONS_00055861-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length142

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055861-protein ID=TCONS_00055861-protein|Name=TCONS_00055861-protein|organism=Clytia hemisphaerica|type=polypeptide|length=142bp
ERQSIEVNTILQRVQNMCSLDDNANLDDSEGIQMEVVRSVDEEAPVTLEE
SIVYDRTTTTRNSSRKTEVEVKAQSKNKPKNVKFSIEEDEQLLKGILRHG
EKSWTAILKDTRYQFHPTRNRDSLRVRADTAAFKKLKKNQPK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035175XLOC_035175Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055861TCONS_00055861Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR009057Homeobox-like
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.10.60coord: 71..142
e-value: 1.2E-9
score: 37.2
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 83..125
e-value: 1.3E-5
score: 25.1
IPR009057Homeobox domain-likeSUPERFAMILY46689Homeodomain-likecoord: 80..127

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00055861-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top