TCONS_00055999-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055999-protein
Unique NameTCONS_00055999-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length654

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055999-protein ID=TCONS_00055999-protein|Name=TCONS_00055999-protein|organism=Clytia hemisphaerica|type=polypeptide|length=654bp
GEINIKMGISGLTSYINNLQQTMFKERIKLNSSCLVIDGFALFYALMKTA
RRREFGGDYDLLREHLNIFFSKLSKMDIQVYVVLDGGNNIDLKKATIEKR
KVQMIEKVTEFNRLGLGYRQIGDLPIPLLSMSLFREVMEIHENVKYIVCD
QEADLLVASLANQLDGYVVTNDSDFFLLDLKKGLITITSLCDSIKQSQPY
CTIYKQQNLSQYLGISPDLLPIIALVLGNDYSVDCYRLQLLSLMGIQPRD
KIDVKIEHIMKYLKGAVSVDRLLQTLCCGNEEMQSQLSKELEEYNVHQFD
GLSQEYIGYFETQQKETAARNFFDSKNKLKNFIDQLVRAGLIDACVLDLL
NYKTHFVNVQCELIAKRCTSVCSSVLRRYLYGMLLKQDEIVVEYTRSGQQ
YRPKMVRPSNDLPSLDELWSRSEEERQSFFLDLLDIPLEGRGAIISPAHQ
SSLFIITLQYFTQVHSTSEDQTNAFLEMHLILRNGNRCFDVPHLDQAMLH
VYSSFHTVFYYINLINTLLGEPFVTPKASQLMSGSVFQSLCQRGNKDFKA
DYAKEDLTDLETYQNFILPNMMDKVQPRSSSKKNNQHHHHYHHHRHHQGL
KNSQLSNDALPRKPASQSGSKKSTFPSTNKKPSAQASNKKPSNRFQLLSI
SDDE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035242XLOC_035242Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055999TCONS_00055999Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006085XPG_DNA_repair_N
IPR029060PIN_domain-like
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
Vocabulary: Molecular Function
TermDefinition
GO:0004518nuclease activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006281 DNA repair
molecular_function GO:0004518 nuclease activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
50100150200250300350400450500550600650Score = Expect = 7.6E-20 / Score = 71.0Score = SequenceSM00485PF00752PF12813mobidb-liteG3DSA:3.40.50.1010SSF88723
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006085XPG N-terminalSMARTSM00485xpgn3coord: 7..107
e-value: 0.003
score: 13.4
IPR006085XPG N-terminalPFAMPF00752XPG_Ncoord: 7..102
e-value: 1.4E-6
score: 28.6
NoneNo IPR availablePFAMPF12813XPG_I_2coord: 130..237
e-value: 2.2E-9
score: 37.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 575..654
IPR029060PIN domain-likeGENE3D3.40.50.1010coord: 7..215
e-value: 7.6E-20
score: 71.0
IPR029060PIN domain-likeSUPERFAMILY88723PIN domain-likecoord: 7..190

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00055999-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
50100150200250300350400450500550600650Expect = 2.44e-23 / Id = 33.62SequenceASTE1
Match NameE-valueIdentityDescription
ASTE12.441e-2333.62Protein asteroid homolog 1 OS=Homo sapiens GN=ASTE... [more]
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