TCONS_00056148-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056148-protein
Unique NameTCONS_00056148-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length276

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056148-protein ID=TCONS_00056148-protein|Name=TCONS_00056148-protein|organism=Clytia hemisphaerica|type=polypeptide|length=276bp
TIVFISSTSTVVKASYELQSLINTLWKEDTNRLVFGKDIRLNYQNQASWS
TARDVSYKPLFYSVNTNVFSKPTFRAFIALLDNYESDTYSRESVPTSEIN
ENYHFLNEVLKTNAMKKVHEYLRRKNKAPYSSSQFKSALYDLWFQMYYRS
SVRGSSGFEHVFVGETKSDGQVSGFHNWIQFYLEEKNRNLNYYGYLKKSS
SSPYLSIVKYTWQKKIKHIGSSFYGTSPEFEFALYSLVYMMGYERLQFSL
DGMQVKITCFGMNRNRNIGTCYPDLV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035350XLOC_035350Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056148TCONS_00056148Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018998Endoribonuclease_XendoU
Vocabulary: Molecular Function
TermDefinition
GO:0016788hydrolase activity, acting on ester bonds
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016788 hydrolase activity, acting on ester bonds
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018998Endoribonuclease XendoUPFAMPF09412XendoUcoord: 17..273
e-value: 3.9E-89
score: 298.3
NoneNo IPR availableSUPERFAMILY142877EndoU-likecoord: 15..275

Blast
[Close]
BLAST of TCONS_00056148-protein vs. Swiss-Prot (Human)
Match: ENDOU (Poly(U)-specific endoribonuclease OS=Homo sapiens GN=ENDOU PE=1 SV=2)

HSP 1 Score: 179.104 bits (453), Expect = 1.031e-53
Identity = 107/249 (42.97%), Postives = 151/249 (60.64%), Query Frame = 0 
Query:   17 ELQSLINTLWKEDTNRLVFGKDIRLNYQNQASWSTAR---DVSYKPLFYSVNTNVFSKPTFRAFIALLDNYESDTYSRESVPTSEINENYHFLNEVLKTNAMKKVHEYLRRKNKAPYSSSQ-FKSALYDLWFQMYYRSSVRG-SSGFEHVFVGETKSDGQVSGFHNWIQFYLEEKNRNLNYYGYLKKS--SSSPYLSIVKYTWQKKIKHIGSSFYGTSPEFEFALYSLVYMMGYERL-QFSLDGMQVKI 257
            E+QS+   +++ DTN+    +DI LN QN  S S  R   D   KPLF  VN  +FSKPT+ AFI LL+NY+  T   E     E+ E   FL E++KT  MK+++ +L  +N+  Y S Q F   L ++WF +Y R +  G SSGFEHVF GE K  G+V+GFHNWI+FYLEEK   ++YY ++      S P +  +++ W    K +GS+F G+SPEFEFALYSL ++    ++ Q SL G  + +
Sbjct:  140 EIQSISEKIYRADTNK-AQKEDIVLNSQNCISPSETRNQVDRCPKPLFTYVNEKLFSKPTYAAFINLLNNYQRATGHGEHFSAQELAEQDAFLREIMKTAVMKELYSFLHHQNR--YGSEQEFVDDLKNMWFGLYSRGNEEGDSSGFEHVFSGEVKK-GKVTGFHNWIRFYLEEKEGLVDYYSHIYDGPWDSYPDVLAMQFNWDGYYKEVGSAFIGSSPEFEFALYSLCFIARPGKVCQLSLGGYPLAV 384
The following BLAST results are available for this feature:
BLAST of TCONS_00056148-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ENDOU1.031e-5342.97Poly(U)-specific endoribonuclease OS=Homo sapiens ... [more]
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