TCONS_00056311-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056311-protein
Unique NameTCONS_00056311-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length132

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056311-protein ID=TCONS_00056311-protein|Name=TCONS_00056311-protein|organism=Clytia hemisphaerica|type=polypeptide|length=132bp
MYTEDYQVAAVKSYFPLFDEYKKSYFVGEMIWNFADFATAQGTTRVAGNK
KGLFTRSRQPKRIAYVIRERYRKMPSLNLVHTTDEEKKRTTANTKSLEEY
DDLTDYNGETYYDQDFTNGGVSDDGVDIIPAL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035475XLOC_035475Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056311TCONS_00056311Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006103Glyco_hydro_2_cat
IPR017853Glycoside_hydrolase_SF
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006103Glycoside hydrolase family 2, catalytic domainPFAMPF02836Glyco_hydro_2_Ccoord: 4..74
e-value: 1.6E-11
score: 43.8
NoneNo IPR availableGENE3D3.20.20.80coord: 1..76
e-value: 1.3E-7
score: 30.8
IPR017853Glycoside hydrolase superfamilySUPERFAMILY51445(Trans)glycosidasescoord: 2..73

Blast
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BLAST of TCONS_00056311-protein vs. Swiss-Prot (Human)
Match: BGLR (Beta-glucuronidase OS=Homo sapiens GN=GUSB PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 2.288e-23
Identity = 41/74 (55.41%), Postives = 55/74 (74.32%), Query Frame = 0 
Query:    1 MYTEDYQVAAVKSYFPLFDEYKKSYFVGEMIWNFADFATAQGTTRVAGNKKGLFTRSRQPKRIAYVIRERYRKM 74
            M+TE+YQ + ++ Y    D+ ++ Y VGE+IWNFADF T Q  TRV GNKKG+FTR RQPK  A+++RERY K+
Sbjct:  556 MFTEEYQKSLLEQYHLGLDQKRRKYVVGELIWNFADFMTEQSPTRVLGNKKGIFTRQRQPKSAAFLLRERYWKI 629
The following BLAST results are available for this feature:
BLAST of TCONS_00056311-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BGLR2.288e-2355.41Beta-glucuronidase OS=Homo sapiens GN=GUSB PE=1 SV... [more]
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