TCONS_00056399-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056399-protein
Unique NameTCONS_00056399-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length287

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056399-protein ID=TCONS_00056399-protein|Name=TCONS_00056399-protein|organism=Clytia hemisphaerica|type=polypeptide|length=287bp
MLNALNRGYRVKYDYDKILRCFTSQLSTNYTFVDIEKRAEKIYSINLRNK
PVNALGLEFMVDIANALKELERNDDCKAVMFVSNLETFSAGFQSNELLTQ
DLKRMESFWSTAQNLGLSILKTPLITASAVEGSCIAGGCYFPFLSDISVM
SSSDKLRIGIAATRMGIVPPKILLLPLQNLVGFRKAEFYASRSILLKPEE
AHKCGMIQTVVPRSEVLKTAINQINLYLQIPESGLLENKRLFNAKILQEI
DNESFLKAEVKDFCDRLQEPETQQKMQSHFDKFSKRN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035544XLOC_035544Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056399TCONS_00056399Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001753Crotonase_core_superfam
IPR029045ClpP/crotonase-like_dom
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
molecular_function GO:0003824 catalytic activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.226.10coord: 24..286
e-value: 1.5E-32
score: 112.2
NoneNo IPR availableCDDcd06558crotonase-likecoord: 48..221
e-value: 5.92886E-31
score: 114.58
IPR001753Crotonase superfamilyPFAMPF00378ECH_1coord: 40..280
e-value: 1.6E-33
score: 116.0
IPR029045ClpP/crotonase-like domainSUPERFAMILY52096ClpP/crotonasecoord: 29..282

Blast
[Close]
BLAST of TCONS_00056399-protein vs. Swiss-Prot (Human)
Match: ECI1 (Enoyl-CoA delta isomerase 1, mitochondrial OS=Homo sapiens GN=ECI1 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 9.597e-32
Identity = 76/281 (27.05%), Postives = 135/281 (48.04%), Query Frame = 0 
Query:    4 ALNRGYRVKYDYDKILRCFTSQLSTNYTFVDIEKRAEKIYSINLRNKPVNALGLEFMVDIANALKELERNDDCKAVMFVSNLE-TFSAGFQSNELLTQDLKRMESFWSTAQNLGLSILKTPLITASAVEGSCIAGGCYFPFLSDISVMSSSDKLRIGIAATRMGIVPPKILLLPLQNLVGFRKAEFYASRSILLKPEEAHKCGMIQTVVPRSEVLKTAINQINLYLQIPESGLLENKRLFNAKILQEIDNESFLKAEVKDFCDRLQEPETQQKMQSHFDKF 283
            AL R  R     D   R F SQ       V+ +  A  +  +  +N PVN+L LEF+ ++  +L++LE +   + V+  S+    FSAG    E+  +       +W   Q L L + ++ L+  SA+ G+C AGGC      D  +++ + +  IG+  T++GI+ P  L   L+N +G R AE      +L  P EA + G++  VVP  +V  TA++ I  ++ IP+      K +        +  +    A+V++F   + +   Q+ +Q + ++ 
Sbjct:   25 ALGRTERAAGGGDGARR-FGSQ----RVLVEPDAGA-GVAVMKFKNPPVNSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMCGRSPAHYAGYWKAVQELWLRLYQSNLVLVSAINGACPAGGCLVALTCDYRILADNPRYCIGLNETQLGIIAPFWLKDTLENTIGHRAAERALQLGLLFPPAEALQVGIVDQVVPEEQVQSTALSAIAQWMAIPDHARQLTKAMMRKATASRLVTQR--DADVQNFVSFISKDSIQKSLQMYLERL 297
The following BLAST results are available for this feature:
BLAST of TCONS_00056399-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ECI19.597e-3227.05Enoyl-CoA delta isomerase 1, mitochondrial OS=Homo... [more]
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