TCONS_00056857-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056857-protein
Unique NameTCONS_00056857-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length510

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056857-protein ID=TCONS_00056857-protein|Name=TCONS_00056857-protein|organism=Clytia hemisphaerica|type=polypeptide|length=510bp
MPMGAAPSVGRLPASLKLTYGVGHVLNDLCASMWFSYMLLYMHKVVTFNN
VNAGFVVLAGQIADAISTPFVGLQSDKTYNVKYGRRKIWHLVGVICVTCS
FPFIFHLCVGGCANAPQYALMVYYIPFIVIFQFGWASTQISHLSLIPELT
HCQQGKVELNAIRYFATVLSNLVVFFVCFVLFELKSSKTSGNQDLESSLS
IADADKFFILATSVVALGVFFMVIFHLFVKEPSCTKEIDSVNEEEQEHLV
GGAKKPQLAQKTVNDWFKTPVFYKVGWLYMMTRLIVNISQVYLAYFVTET
LKLNKSAIAIAPAVVYVTGIFASLIAKKLNRALGLKFTYFFGLCFILAGS
VYFYFMRSLDIKYRPAVYGACVCLGLGGSTLLINSLAMISQMIGRNVDTS
AFVYGSMSLLDKFSNGAAIMLIQFLHPCKDQVICCYSCQLYYRNIMSYFP
GVCAVLAFLVLMTIGKNTFENPQDENDVDADKRSIHSYGSVESDVRINQP
RTYSSDNIPT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035818XLOC_035818Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056857TCONS_00056857Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020846MFS_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1250.20coord: 12..261
e-value: 3.4E-15
score: 55.3
NoneNo IPR availablePFAMPF13347MFS_2coord: 20..462
e-value: 1.0E-32
score: 113.2
NoneNo IPR availableGENE3D1.20.1250.20coord: 262..483
e-value: 8.0E-14
score: 50.9
IPR020846Major facilitator superfamily domainSUPERFAMILY103473MFS general substrate transportercoord: 19..475

Blast
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BLAST of TCONS_00056857-protein vs. Swiss-Prot (Human)
Match: MFS12 (Major facilitator superfamily domain-containing protein 12 OS=Homo sapiens GN=MFSD12 PE=1 SV=2)

HSP 1 Score: 369.007 bits (946), Expect = 3.126e-123
Identity = 206/444 (46.40%), Postives = 277/444 (62.39%), Query Frame = 0 
Query:   13 PASL--KLTYGVGHVLNDLCASMWFSYMLLYMHKVVTFNNVNAGFVVLAGQIADAISTPFVGLQSDKTYN--VKYGRRKIWHLVGVICVTCSFPFIFHLCVGGCANAPQYALMVYYIPFIVIFQFGWASTQISHLSLIPELTHCQQGKVELNAIRYFATVLSNLVVFFVCFVLFELK-SSKTSGNQDLESS--LSIADADKFFILATSVVALGVFFMVIFHLFVKEPSCTKEIDSVNEEEQEH---LVGGAKKPQLAQKTVNDWFKTPVFYKVGWLYMMTRLIVNISQVYLAYFVTETLKLNKSAIAIAPAVVYVTGIFASLIAKKLNRALGLKFTYFFGLCFILAGSVYFYFMRSLDIKYRPAVYGACVCLGLGGSTLLINSLAMISQMIGRNVDTSAFVYGSMSLLDKFSNGAAIMLIQFLHPCKDQVICCYSCQLYYRNIM 446
            P SL  +L+Y VGH LNDLCASMWF+Y+LLY+H V  +++  AG ++L GQ+AD + TP VG ++D+  +   +YG RK WHLVG +CV  SFPFIF  C+G  A  P++A ++YY PFIVIFQFGWASTQISHLSLIPEL      KVEL A+RY  TV++N+ V+   ++L  L+ SS+    QD+  S  L   D   F  L+  VV +G  F ++FHL  +E           EE  EH   L     +P L  K    W + P FY+VG LYM TRLIVN+SQ Y+A ++T +L L K  IA  P V+Y++G  +S + K +N+ +G   TYF GL  ILA + +      L +    AVY A V LG G +T+L+ SLAM + +IG + ++ AFVYGSMS LDK +NG A+M IQ LHPC  + +CC +C  +Y   M
Sbjct:   16 PLSLVARLSYAVGHFLNDLCASMWFTYLLLYLHSVRAYSSRGAGLLLLLGQVADGLCTPLVGYEADRAASCCARYGPRKAWHLVGTVCVLLSFPFIFSPCLGCGAATPEWAALLYYGPFIVIFQFGWASTQISHLSLIPELVTNDHEKVELTALRYAFTVVANITVYGAAWLLLHLQGSSRVEPTQDISISDQLGGQDVPVFRNLSLLVVGVGAVFSLLFHLGTRE-----RRRPHAEEPGEHTPLLAPATAQPLLLWK---HWLREPAFYQVGILYMTTRLIVNLSQTYMAMYLTYSLHLPKKFIATIPLVMYLSGFLSSFLMKPINKCIGRNMTYFSGLLVILAFAAWVALAEGLGV----AVYAAAVLLGAGCATILVTSLAMTADLIGPHTNSGAFVYGSMSFLDKVANGLAVMAIQSLHPCPSE-LCCRACVSFYHWAM 446
The following BLAST results are available for this feature:
BLAST of TCONS_00056857-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MFS123.126e-12346.40Major facilitator superfamily domain-containing pr... [more]
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