TCONS_00056879-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056879-protein
Unique NameTCONS_00056879-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length115

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056879-protein ID=TCONS_00056879-protein|Name=TCONS_00056879-protein|organism=Clytia hemisphaerica|type=polypeptide|length=115bp
FVKAKKTLKTDYYAETGIINYYPEGASMGGHTDHYEEELCQPLISYSFGQ
SAIYLIGGPTRDVKPEAIWVRSGDIMLMTGPSRVAFHAVPCIITKPSKTT
PENIGDCPLVLESDN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035835XLOC_035835Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056879TCONS_00056879Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027450AlkB-like
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027450Alpha-ketoglutarate-dependent dioxygenase AlkB-likePFAMPF135322OG-FeII_Oxy_2coord: 10..99
e-value: 1.7E-25
score: 90.3
IPR027450Alpha-ketoglutarate-dependent dioxygenase AlkB-likeGENE3D2.60.120.590coord: 2..103
e-value: 8.6E-24
score: 83.9
NoneNo IPR availableSUPERFAMILY51197Clavaminate synthase-likecoord: 10..95

Blast
[Close]
BLAST of TCONS_00056879-protein vs. Swiss-Prot (Human)
Match: ALKB1 (Nucleic acid dioxygenase ALKBH1 OS=Homo sapiens GN=ALKBH1 PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 6.444e-24
Identity = 43/86 (50.00%), Postives = 62/86 (72.09%), Query Frame = 0 
Query:   11 DYYAETGIINYYPEGASMGGHTDHYEEELCQPLISYSFGQSAIYLIGGPTRDVKPEAIWVRSGDIMLMTGPSRVAFHAVPCIITKP 96
            D+ AE GI+NYY   +++G H D  E +  +PL+S+SFGQSAI+L+GG  RD  P A+++ SGDIM+M+G SR+  HAVP ++  P
Sbjct:  211 DFRAEAGILNYYRLDSTLGIHVDRSELDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMFMHSGDIMIMSGFSRLLNHAVPRVLPNP 296
The following BLAST results are available for this feature:
BLAST of TCONS_00056879-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ALKB16.444e-2450.00Nucleic acid dioxygenase ALKBH1 OS=Homo sapiens GN... [more]
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