TCONS_00056894-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056894-protein
Unique NameTCONS_00056894-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length294

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056894-protein ID=TCONS_00056894-protein|Name=TCONS_00056894-protein|organism=Clytia hemisphaerica|type=polypeptide|length=294bp
MENTGQASKRRAQPSESDVENEPQAKISNNFDPDAPFSKPWQNSDAVLIV
EEKELHVHTNILSMASAVFDKMFNGDFVESQTKRVNLEGKSYEVIESLLS
SIYPMENSLEAKTAQICCECSSIDRSVTAFKPFPSRRCVKCNEFFDQDDV
QRQQNLKHLQKIYPLAKEYMMDALKERILSQYSQQCYFIMSVSHALDLLE
TFEVLNLDDEKHTEETEVKDRVIEFLSGHLPNDLKEIKSLLNGRNISLRY
QLHLKALALDEALRNLYDKTADQKYKTEAQLFVQDLLYMHSFKY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035840XLOC_035840Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056894TCONS_00056894Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000210BTB/POZ_dom
IPR011333SKP1/BTB/POZ
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
50100150200250Expect = 3.1E-9 / Score = 46.7Score = 15.204Expect = 3.3E-21 / Score = 75.2Score = Score = Score = SequenceSM00225PF00651PS50097G3DSA:3.30.710.10mobidb-liteSSF54695
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000210BTB/POZ domainSMARTSM00225BTB_4coord: 44..186
e-value: 3.1E-9
score: 46.7
IPR000210BTB/POZ domainPFAMPF00651BTBcoord: 39..114
e-value: 4.1E-14
score: 52.6
IPR000210BTB/POZ domainPROSITEPS50097BTBcoord: 44..111
score: 15.204
NoneNo IPR availableGENE3D3.30.710.10coord: 39..236
e-value: 3.3E-21
score: 75.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38
IPR011333SKP1/BTB/POZ domainSUPERFAMILY54695POZ domaincoord: 42..108
coord: 154..176

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056894-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
50100150200250Sequence
Match NameE-valueIdentityDescription
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