TCONS_00057226-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057226-protein
Unique NameTCONS_00057226-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length607

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057226-protein ID=TCONS_00057226-protein|Name=TCONS_00057226-protein|organism=Clytia hemisphaerica|type=polypeptide|length=607bp
MISSQMRSTAKINKKLLLNNILQRSKTVFSGSKTGDFFQENPVLKNQFED
DQLLDKHLKSVLPDQIYKEVRPDLVNFGQRVATEVLAYHQDVSNYEPTLH
QYSAWGERIDHIQTHPSWKKLHDVAAEEKLISIPYENKQGIWSRTLQVAK
LYLFSPSSGLYSCPLAMTDGAASILKSRKEDVFQQAYSHLTSNDPDLFWT
SGQWMTEKKGGSDVGNATQTRAVRQSDGSYKLYGFKWFTSATDANMAMTL
ARIEDENDETKEGTKGLTMFYLETRDKEGRLNGIRMEKLKKKLGTRQMPT
AEMILEGTKAYQVSKEGRGIASISPMLTVTRIHNSIMAVSNTRRLLNWSK
DFARKRVAFGHKLIHNPLHLQTLARIQVELEGGFYMLMKVAHLFGLEENQ
VATDHELMLLRILTPLLKLYTGKQSVAASSELLESFGGHGYLEDTGLPQY
LRDAQVLSIWEGTTNVLSMDVLRSITKTNGEVLRALLADCMSNIASVPSS
SDHGLSATRQSIVQAINDISSFAKLSVTKDETFMMAAARDFSYSLARTYI
ASLLYGNASRCPDDGRTTEVAIRWTLLNDLAPINKALDNERIYSKTDFKN
DNAIIYS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036051XLOC_036051Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057226TCONS_00057226Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009075AcylCo_DH/oxidase_C
IPR006091Acyl-CoA_Oxase/DH_cen-dom
IPR009100AcylCoA_DH/oxidase_NM_dom
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016627oxidoreductase activity, acting on the CH-CH group of donors
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009075Acyl-CoA dehydrogenase/oxidase C-terminalPFAMPF00441Acyl-CoA_dh_1coord: 317..475
e-value: 6.7E-26
score: 91.2
IPR009075Acyl-CoA dehydrogenase/oxidase C-terminalSUPERFAMILY47203Acyl-CoA dehydrogenase C-terminal domain-likecoord: 325..485
NoneNo IPR availableGENE3D2.40.110.10coord: 201..306
e-value: 1.6E-22
score: 79.2
NoneNo IPR availableGENE3D1.20.140.10coord: 307..486
e-value: 5.3E-34
score: 116.9
IPR006091Acyl-CoA oxidase/dehydrogenase, central domainPFAMPF02770Acyl-CoA_dh_Mcoord: 204..306
e-value: 7.6E-17
score: 61.2
IPR009100Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domainSUPERFAMILY56645Acyl-CoA dehydrogenase NM domain-likecoord: 108..326

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057226-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top