TCONS_00057402-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057402-protein
Unique NameTCONS_00057402-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length120

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057402-protein ID=TCONS_00057402-protein|Name=TCONS_00057402-protein|organism=Clytia hemisphaerica|type=polypeptide|length=120bp
IGFKEALRYFPYTCFVFHDVDLVPENDRIFYDCRQSPAHMSVAVETLGYM
PLQYEHFGGVVSTTKAHFELANGYSNIFWQWGGEDDNVSHRLRKNGLKIH
RQPKNVAGYKMLSHTPAKRE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036161XLOC_036161Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057402TCONS_00057402Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003859Galactosyl_T
IPR027791Galactosyl_T_C
IPR029044Nucleotide-diphossugar_trans
IPR027995Galactosyl_T_N
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016757transferase activity, transferring glycosyl groups
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003859Beta-1,4-galactosyltransferasePRINTSPR02050B14GALTRFASEcoord: 51..72
score: 30.47
coord: 14..33
score: 56.64
coord: 73..91
score: 55.92
IPR027791Galactosyltransferase, C-terminalPFAMPF02709Glyco_transf_7Ccoord: 39..114
e-value: 2.5E-21
score: 75.0
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10coord: 1..119
e-value: 6.1E-14
score: 51.4
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 1..115
IPR027995Galactosyltransferase, N-terminalPFAMPF13733Glyco_transf_7Ncoord: 1..33
e-value: 3.4E-11
score: 42.8

Blast
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BLAST of TCONS_00057402-protein vs. Swiss-Prot (Human)
Match: B4GT1 (Beta-1,4-galactosyltransferase 1 OS=Homo sapiens GN=B4GALT1 PE=1 SV=5)

HSP 1 Score: 109.383 bits (272), Expect = 1.234e-29
Identity = 51/119 (42.86%), Postives = 74/119 (62.18%), Query Frame = 0 
Query:    1 IGFKEALRYFPYTCFVFHDVDLVPENDRIFYDCRQSPAHMSVAVETLGYMPLQYEHFGGVVSTTKAHFELANGYSNIFWQWGGEDDNVSHRLRKNGLKIHRQPKNVAGYKMLSHTPAKR 119
            +GF+EAL+ + YTCFVF DVDL+P ND   Y C   P H+SVA++  G+     ++FGGV + +K  F   NG+ N +W WGGEDD++ +RL   G+ I R    V   +M+ H+  K+
Sbjct:  230 VGFQEALKDYDYTCFVFSDVDLIPMNDHNAYRCFSQPRHISVAMDKFGFSLPYVQYFGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGRCRMIRHSRDKK 348
The following BLAST results are available for this feature:
BLAST of TCONS_00057402-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
B4GT11.234e-2942.86Beta-1,4-galactosyltransferase 1 OS=Homo sapiens G... [more]
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