TCONS_00058094-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058094-protein
Unique NameTCONS_00058094-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length434

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058094-protein ID=TCONS_00058094-protein|Name=TCONS_00058094-protein|organism=Clytia hemisphaerica|type=polypeptide|length=434bp
GIIDIMEEQHKFVPRLRNGLVRLLTAGDLMTVEREINAQIDKEDSFTSSQ
RLEGLIPILADFHTYGNFLELMWDVLYDPASSADVGTLFQARNYLNARNV
KRDPMKSVNACEDLMMKYSEALIVTAFQTHCKEKGISFRNHSTREDEFKT
AIKDVVQTYVLPETKDMSKIVSQFDCSECKSKFKSLQNLKKHLKEKHDNK
KYHPSTTPDCDRKMNYLRNALALCFLCKNFIDARNFGDGGRIVRLYKYFM
LFFRVNNQYKYAGQALHLLAQIKCLLPPALAFEIIWNRSVNTKGKPDSNV
ELDRHLEHRNKYAKENIKGLHGKVTDKSIERISKSYEQIENHVKKLDQTL
GIKEPSGKHSKVNWESDVVELMKHFDDCDLLKSQDGRVFKCFPNFPNNYL
HYMDTLELKKWILKNVMKCARNHIYENKGTITNE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036607XLOC_036607Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058094TCONS_00058094Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 176..196
NoneNo IPR availableCOILSCoilCoilcoord: 329..349
NoneNo IPR availableGENE3D2.40.155.10coord: 124..374
e-value: 2.4E-5
score: 24.0
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 174..197
e-value: 0.0083
score: 25.3
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 176..197
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 174..202
score: 11.157

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058094-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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